Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212317g00002 ATGGCTGGTACTGTGAAACTCAATGGTGATAGTAGAATTGAGAATCTGATTTCTGCTAGGAAGTCATTGAAGCTTAGCTTAGAGAAATCAAAGTCTCTAGGGTTAGCATTGGATAAAGCAGGGCCTAGGTTAGAGGAGATTGGGCAAAGATTGCCGTCGCTTGAAGCCGCGGTTAGGCCAATTCGTGCCGATAAGGATGCTCTGGTGGCCGTTGGTGGCCACATTAATCGTGCCGTTGGTCCTGCGGCGGCGGTGCTTAAGGTATTTGATGCCGTTCATGGCCTTGAAAAGTCGCTGTTGTCGGATCTGAGGAATGATCTGGCTGGATACATGGCGGTTTTGAAGCGTCTCGAGGAGGCGCTGCGGTTCTTGGGAGAGAATTGTGGGTTGGCAATTCAATGGCTGGAGGATATAGTGGAGTATTTGGAGGATAACACGGTTGCCGACGAGAGATATCTTGCGAGTTTGAAGAAGGCCTTGAAGAATCTTAGGGAGTTGCAGAACGACAAGGAGAAAGCGCGGCTTGATGGTGGGCTTTTGGAAGCTGCATTGCATAAATTGGAGAATGAGTTCCGCCAGCTCTTGACTGAGAACAGTGTGCCGCTTCCAATGGCTGCTGCGCTTGGGGATCAAGCATGCATCGCACCATCGCCTTTGCCTGTGTCTGTTATTCACAAGTTGCAGGCTATTCTTGGTAGACTGAAAGCTAATAATAGACTTGAGAAGTGTATATCGATTTATGTTGAAGTCCNNNNNNNNNNGAGAGCGAGTTTGCAGGCTCTCAATTTGGATTACCTTGAAATTTCGGTGTCTGAATTCAATGATGTGCAGAGCATAGAGGGGTATATAGGGCAATGGGGAAAGCATTTAGAATTTGCAGTGAAACATTTGTTTGAGGCTGAGTATAAGCTTTGTAATGATGTATTCGAGAGGATGGGGCCCGATGTTTGGATGGGTTGTTTTTCGAGGATAGCTGCCCAGGCTGGTATACTAGCATTTCTTCAATTTGGGAAGACTGTTACCGAGAGTAAGAAAGACCCCATTAAACTTTTGAAGTTGTTGGATATTTTCTCATCTTTGAACAAATTGAGGCTTGATTTCAACCGTCTATTTGGAGGAGCAGCATGTGCTGAAATCCAGAATTTGACTAGGGATCTTATTAAGAGTGTCATCGATGGTGCAGCAGAGATCTTCTGGGAACTTCTGTTACAGGTGGAGTTGCAGAGGCAGAATCCACCCCCTCTGGATGGAAGTGTTCCGAGATTAGTGAGTTTTATCACTGATTATTGCAACAAATTACTTGGTGAAGACTATAAGCCAGTATTGACACAGGTCTTGGTCATTCACCGGAGTTGGAAGCGGCAGAGCTTTCAGGAGCAACTTCTTGTTACTGAAATTTTGAACATCGTGAAAGCCGTTGAACTGAATTTGGAGACATGGATCAAGGCTTATGAAGATCCTATGCTGTCAAACTTTTTCGCTATGAACAATCACTGGCATCTTTACAAACATTTGAAAGCGACAAAGCTTGGGGATCTCTTGGGAGACTCTTGGTTAAGGGAACACGGAGACTACAAAGAATATTACTCGGCGATCTTCTTGCGAGAGAGCTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGCTGATTCTCTTCTCTGGAGGGCGGGCTACTGCCCGTGATCTGGTCAAGAAAAGGTTGAAAAAGTTCAATGAAGTTTTCGATGAGATGTATGGAAAGCAATCAGGTTGGGTCATGCCGGAACGTGATCTGAGGGAGAAGACATGTCAGCTTATAGTGCAAGCTGTGGTCCCTGTTTACCGGAGTTACATGCAGAATTACGGTCCCTTGGTCGAGCAAGAAGCTAGCTCCACAAAATATGCGAAATACACAGTGCAGAAGCTGGAGGAAATGCTCTCGTGTCTTTATCGGCCAAAGCCTGTGAGACATGCCAGTTTGAGGGGTAGGCAGTTCAGCGGAAAATACGGCAATGGAATGCCAGATCTTCGTCGAACAGCTTCTGCGGTTGTGTAG 2037 0.4595 MAGTVKLNGDSRIENLISARKSLKLSLEKSKSLGLALDKAGPRLEEIGQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDLRNDLAGYMAVLKRLEEALRFLGENCGLAIQWLEDIVEYLEDNTVADERYLASLKKALKNLRELQNDKEKARLDGGLLEAALHKLENEFRQLLTENSVPLPMAAALGDQACIAPSPLPVSVIHKLQAILGRLKANNRLEKCISIYVEVXXXXRASLQALNLDYLEISVSEFNDVQSIEGYIGQWGKHLEFAVKHLFEAEYKLCNDVFERMGPDVWMGCFSRIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFSSLNKLRLDFNRLFGGAACAEIQNLTRDLIKSVIDGAAEIFWELLLQVELQRQNPPPLDGSVPRLVSFITDYCNKLLGEDYKPVLTQVLVIHRSWKRQSFQEQLLVTEILNIVKAVELNLETWIKAYEDPMLSNFFAMNNHWHLYKHLKATKLGDLLGDSWLREHGDYKEYYSAIFLRESWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYGKQSGWVMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQEASSTKYAKYTVQKLEEMLSCLYRPKPVRHASLRGRQFSGKYGNGMPDLRRTASAVV 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212317g00002 678 Pfam Exo70 exocyst complex subunit 285 641 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc212317g00002 678 SUPERFAMILY Cullin repeat-like 85 644 IPR016159 -
Stsc212317g00002 678 FunFam Exocyst subunit Exo70 family protein 135 650 - -
Stsc212317g00002 678 Coils Coil 100 120 - -
Stsc212317g00002 678 Gene3D Exocyst complex component Exo70 132 652 - -
Stsc212317g00002 678 Coils Coil 149 176 - -
Stsc212317g00002 678 PANTHER EXOCYST COMPLEX PROTEIN EXO70 118 640 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212317g00002 Stsc-Chr212317 10376 13629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212317g00002 10 678 EXO70 exocyst subunit family AT4G31540 74.412 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212317g00002 K07195 - gmx:100796139 1137.87