Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212312g00003 ATGACAGAGTATGATCTGTTGGTAGAAGGAGATTTGTTCAAAGCACCAGAGCCTATCATCGAAGAACCACCTATGGACGTGGATTCGATGACTGCAGCAGCCATCTCAATGATATCTTGCGGTGAAGATGTATCCTCGCAGGCTCTAGAACCGAGGGATATCGACATTCTTCAGAACGATCATCAGCTCCTGAGTGAGGTGTTTTATGAGTGCAAAAAGGATCTCATAGAGAAGGCAGCTATAGAGTCCCCACTGTCTGATATATTGGAGATTAATATTCCTCCTCTGAATGTAGATGAGAGTTTCTCTCAGGAAAATAAATATATTCCCGACATGCCGTTAGCGAAGAGTGTCAGCTCAGGAAGCTTGAATGCAATGGATTGGATGAATTCCACTGGCTTGAAGCCTGCTTTTCTAGAATTCCCTGGGATTGATTTCAATTCGGTTTATGGCATGCGGAGAGCATTTAGCGAGGGAGATATAAAGACACTTGGTAATGGAAACATGAACGTTGCTCAATCTCCCCATGATAGGCCTGCTCTTCTTAGCAACTGCACCAGCGAGGAACGGCAAGAAAAACTCTCAAGATATAGAAACAAGAAGACAAAGAGAAATTTCGGAAGGAAGATTAAGTATGCTTGCAGGAAGGCTCTCGCCGACAGCCAGCCAAGAATTCGCGGAAGGTTTGCAAAGACCGAAGAACCGGACATAAAGAGGCGATGA 723 0.4467 MTEYDLLVEGDLFKAPEPIIEEPPMDVDSMTAAAISMISCGEDVSSQALEPRDIDILQNDHQLLSEVFYECKKDLIEKAAIESPLSDILEINIPPLNVDESFSQENKYIPDMPLAKSVSSGSLNAMDWMNSTGLKPAFLEFPGIDFNSVYGMRRAFSEGDIKTLGNGNMNVAQSPHDRPALLSNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEPDIKRR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212312g00003 240 Pfam CCT motif 190 232 IPR010402 GO:0005515
Stsc212312g00003 240 ProSiteProfiles CCT domain profile. 190 232 IPR010402 GO:0005515
Stsc212312g00003 240 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 116 232 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212312g00003 Stsc-Chr212312 20111 22448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212312g00003 186 237 C2C2-CO-like Transcription Factor Family AT5G57660 50.909 5.80e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc212312g00003 CCT 1.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212312g00003 - - gmx:100814332 369.007