Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212312g00002 ATGTATGCAGAAACTGGTCTTTTCTTCCCATATTTGAAGAACTTCTCTCAAGAACTTCAACAGCTTGAGGAGTATTGCATGAATCAGAAATCCAATGATTCAATGAGTGACCTTGCACAATCTTCTGCAATGACAGAGTATGATCTGTTGGTAGAAGGAGATTTGTTCAAAGCACCAGAGCCTATCATCGAAGAACCACCTATGGACGTGGATTCGATGACTGCAGCAGCCATCTCAATGATATCTTGCGGTGAAGATGTATCCTCGCAGGCTCTAGAACCGAGGGATATCGACATTCTTCAGAACGATCATCAGCTCCTGAGTGAGGTGTTTTATGAGTGCAAAAAGGATCTCATAGAGAAGGCAGCTATAGAGTCCCCACTGTCTGATATATTGGAGATTAATATTCCTCCTCTGAATGTAGATGAGAGTTTCTCTCAGGAAAATAAATATATTCCCGACATGCCGTTAGCGAAGAGTGTCAGCTCAGGAAGCTTGAATGCAATGGATTGGATGAATTCCACTGGCTTGAAGCCTGCTTTTCTAGAATTCCCTGGGATTGATTTCAATTCGGTTTATGGCATGCGGAGAGCATTTAGCGAGGGAGATATAAAGACACTTGGTAATGGAAACATGAACGTTGCTCAATCTCCCCATGATAGGCCTGCTCTTCTTAGCAACTGCACCAGCGAGGAACGGCAAGAAAAACTCTCAAGATATAGAAACAAGAAGACAAAGAGAAATTTCGGAAGGAAGATTAAGTATGCTTGCAGGAAGGCTCTCGCCGACAGCCAGCCAAGAATTCGCGGAAGGTTTGCAAAGACCGAAGAACCGGACATAAAGAGGCGATGA 852 0.4366 MYAETGLFFPYLKNFSQELQQLEEYCMNQKSNDSMSDLAQSSAMTEYDLLVEGDLFKAPEPIIEEPPMDVDSMTAAAISMISCGEDVSSQALEPRDIDILQNDHQLLSEVFYECKKDLIEKAAIESPLSDILEINIPPLNVDESFSQENKYIPDMPLAKSVSSGSLNAMDWMNSTGLKPAFLEFPGIDFNSVYGMRRAFSEGDIKTLGNGNMNVAQSPHDRPALLSNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEPDIKRR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212312g00002 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 159 275 IPR045281 GO:0009909
Stsc212312g00002 283 Pfam CCT motif 233 275 IPR010402 GO:0005515
Stsc212312g00002 283 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
Stsc212312g00002 283 Coils Coil 12 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212312g00002 Stsc-Chr212312 18357 22448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212312g00002 229 280 C2C2-CO-like Transcription Factor Family AT5G57660 50.909 7.64e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc212312g00002 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212312g00002 - - aprc:113853022 431.024