Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212297g00001 ATGCTTCCCCGTGAGACCTCATTTCCTTTTATACTCTCTCTCTTTCTCTCTCTCCTCCTCCACCTTCCACCTTCCCCATCTCTTATTCACTTCCTCCCACTTCCCACCGCCCACCACCACCTTCTTCATCTTCTTCTTCCTCTCCTCATACATTTATTTATACATCCCCTTTCATTATTCTCAAACACCAAAACAATTCCCATGGCATCTCCCCAACCAATTATAAACACTCCAGAAACTTCCACCAATAACCCCCAAACCACCTCACTCCCCGATTCCGATTCAAATCCCAACAAACGCCGCAAAATCGCCCACGGCACTCCCGCCGACGCCGCATCTCTCAATCACATCCACTGGACATCCCAATCCGAGCAGCAGATCTACTCCGCCAACCTCCTCCGCACCCTCCGCCAAGTCCTCCGCCGCAACCCTTCCCCCTCCACCACACCATCAAAGTCCCGCCAGGTCCGTTACGCCGCCGACAGAGTCCTCGCCGCCGCCGCCAAAGGCAGAACGCGCTGGAGCCGCGCCATCCTCTCCTCTCCGCCTCCCTTGAATCTCCGCCGGCTGCACCTCCACAAGAAGGCCCCCGACGCGAAGAAGAAGGTTACCGGATTGAGAAGTTTGCGCAACGGAACGGAAAAGAGGAAGTTACCGGCTGTTCAGAGGAAAGCGCGCGTTCTGAGCCGGTTGGTTCCCGGTTGCCGGAAGGTCTCGTTTCCGAACCTTCTAGAAGAAGCCACTGATTATATCTCCGCCTTGGAGATGCAAGTGCGCGCCATGACCGCTCTCGCCGAGTTACTCGCAGGTGGTAACTCGCCGAGTGGACTCGCCGCTGAATCGTTAAGTTGA 852 0.5575 MLPRETSFPFILSLFLSLLLHLPPSPSLIHFLPLPTAHHHLLHLLLPLLIHLFIHPLSLFSNTKTIPMASPQPIINTPETSTNNPQTTSLPDSDSNPNKRRKIAHGTPADAASLNHIHWTSQSEQQIYSANLLRTLRQVLRRNPSPSTTPSKSRQVRYAADRVLAAAAKGRTRWSRAILSSPPPLNLRRLHLHKKAPDAKKKVTGLRSLRNGTEKRKLPAVQRKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALAELLAGGNSPSGLAAESLS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212297g00001 283 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 121 268 IPR044660 GO:0006355
Stsc212297g00001 283 MobiDBLite consensus disorder prediction 70 94 - -
Stsc212297g00001 283 MobiDBLite consensus disorder prediction 70 103 - -
Stsc212297g00001 283 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 206 272 IPR036638 GO:0046983
Stsc212297g00001 283 CDD bHLH_AtIBH1_like 214 265 IPR044549 GO:0006355
Stsc212297g00001 283 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 205 254 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212297g00001 Stsc-Chr212297 3414 4556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212297g00001 118 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 50.327 5.10e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212297g00001 - - adu:107465172 335.495