Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212283g00003 GTTTTTGTGCTGTTATTGAGTGTTGTTGAGGTTGAAGTTCCAGCCAAAATACCAAATCAGAAATTTGCTGGGCTACCTTACATTCCTTCTTTCCCAACTATTCCGTCGTCGCTACCCAACAGGCTTCTTGGATCCTTGAAATTTGACACCGGGAACTCGCCCAATTCGCCCTTTTCCACTCATTTTGATTCTGATACTCTTTCAGCCTTGAGTGATAGCCAGGACCAGCAGCACAGCCCTGGAGAAATTCTATCCAGTGTCAGCCCCTCGTGCAACTCTCCATTCGAAACCAACCATTACTTGCATAGATCAGTCTTGTCTGCCGACGGTATCAGGGAAAGTTTGCAACTCTATTCTGCCAGGAGCTCTCTTCTGCAGAATGCAAATTGTAACCAGAAGATTCGAAACGTGTTGCTGGAATTAGAATCTGCTCTGATGGCCCCTGATGATGAAGAAGTCACTACATCGAATGCTTCGATGGTTGAGAGCAGCGGGCCAACAACATCCGAGCAAAGAAATAGGCCATGGAGCCATGATCACTATGGGTCGCAGTTTGTTCAGAGCCAGGCATCATATGTTGCTGGAAGCAGCCAAACAAGTGAGTTTGAACATGTTGTAAAACGTCAGAAATCGATGGTGGAAGCATCATCACCGCCGGGTTTCCCTGGAAATTTGAAACAATTGCTGGTTGCTTGTGCTGAGGCCATGTCTGATGGCAACATGAATGCTTTTGATCAATTGATATCAAAGGCTAAAGCTGCTGTATCTATCACTGGGGAGCCGTTGCAACGGCTCGGTGCTTACATGGTAGAAGGACTTGTTGCAAGGAAGGAAGCATCGGGGACTGGCATCTACCGCGCCCTTAAGTGCAGAGAGCCGGAAGGCAAAGACTTACTTTCATACATGCAAATGCTGTTTGAAATCTGTCCCTATCTAAAATTTGGTTACATGGCAGCCAACGGAGCAATCGCCGAAGC 977 0.4698 VFVLLLSVVEVEVPAKIPNQKFAGLPYIPSFPTIPSSLPNRLLGSLKFDTGNSPNSPFSTHFDSDTLSALSDSQDQQHSPGEILSSVSPSCNSPFETNHYLHRSVLSADGIRESLQLYSARSSLLQNANCNQKIRNVLLELESALMAPDDEEVTTSNASMVESSGPTTSEQRNRPWSHDHYGSQFVQSQASYVAGSSQTSEFEHVVKRQKSMVEASSPPGFPGNLKQLLVACAEAMSDGNMNAFDQLISKAKAAVSITGEPLQRLGAYMVEGLVARKEASGTGIYRALKCREPEGKDLLSYMQMLFEICPYLKFGYMAANGAIAEA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212283g00003 326 MobiDBLite consensus disorder prediction 54 88 - -
Stsc212283g00003 326 MobiDBLite consensus disorder prediction 150 180 - -
Stsc212283g00003 326 Pfam GRAS domain family 225 326 IPR005202 -
Stsc212283g00003 326 ProSiteProfiles GRAS family profile. 216 326 IPR005202 -
Stsc212283g00003 326 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 201 326 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212283g00003 Stsc-Chr212283 14354 15392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212283g00003 223 326 GRAS Transcription Factor Family AT1G50600 56.731 8.91e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc212283g00003 GRAS 2.2e-22 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212283g00003 - - adu:107462432 557.37