Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212283g00002 ATGACTCTCCTCCAAGCTCTTGCTGCAAGACCTTGTGGACCTCCCCATGTGAGGATTACAGGGATTGATGACCCTGTTTCTAGGTATGCTCGTGGCGAAGGACTAGAGGTAGTTCGGAAAAGGCTGGCCATGATGTCTGAGAAGTTTCGCATACCGGTCGAGTTTCATGGAGTGCCGGTTTATGCTCCGGATGTGACCAGAGACATGCTGGATATCAGGCCCGGAGAGGCTTTGGCTGTGAACTTCCCTTTGCAACTTCACCACACCGCCGACGAGAGTGTTGATTTGAATAACCCAAGGGATGGAATCCTCAGATTGGTGAAGTCGCTTTCGCCGAAGGTGGTAACATTGGTGGAGCAGGAATCAAACACAAACACAACACCATTTTTCAACAGATTCATAGAGACACTAGACTACTACTTGGCAATCTTCGAGTCCATCGATGTCACGCTACCACGAAACAGCAAGGAGAGGATAAATGTAGAGCAGCATTGTCTGGCCAGGGATATTGTAAACATTGTGGCATGTGAAGGGAAGGAGAGGGTCGAGCGGCACGAGCTGTTCGGCAAGTGGAAGTCAAGGTTGACGATGGCCGGATTCCGGCAGTGTCCTTTGAGCTCCTATGTGAATTCTGTTATAAGAAGCCTTCTGAGGTGCTATTCTGAACACTATACCTTGGTGGAGAAGGATGGAGCCATGTTGTTGGCATGGAAGAACAGGAATTTGATATCAGCTTCAGCATGGCACTGA 750 0.492 MTLLQALAARPCGPPHVRITGIDDPVSRYARGEGLEVVRKRLAMMSEKFRIPVEFHGVPVYAPDVTRDMLDIRPGEALAVNFPLQLHHTADESVDLNNPRDGILRLVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLPRNSKERINVEQHCLARDIVNIVACEGKERVERHELFGKWKSRLTMAGFRQCPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLAWKNRNLISASAWH 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212283g00002 249 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 245 IPR005202 -
Stsc212283g00002 249 Pfam GRAS domain family 1 248 IPR005202 -
Stsc212283g00002 249 ProSiteProfiles GRAS family profile. 1 249 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212283g00002 Stsc-Chr212283 13377 14311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212283g00002 1 248 GRAS Transcription Factor Family AT5G48150 64.113 4.87e-111 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc212283g00002 GRAS 3.2e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212283g00002 - - adu:107462432 488.419