Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212276g00002 ATGTTGGGGCAAACACAACGTCTGAATGTTGTCCCCACGGTGACGATGCTGGGAGTGATGAAGGCTCGTTTGGTTGGAGCCACGCGTGGTCACGCTCTCCTAAAGAAGAAGAGCGATGCGCTTACTGCAAAGTATGTTGCTGGTGACAACATCAAGTATGTTGTGCTTGAGAATGTTCGAGAGGCATCCCTCAAGGTCCGGTCCCGGCAGGAGAATGTTGCTGGTGTGAAGCTTCCCAAGTTCGAGTACACCAATGACGGCGAGGTTAACAAGAATGACCTCACTGGATTCGCCCGAGGTGGCCAGCAGGTGCAGCAGTGCCGAGCTGCTTACATCAAGGCAATTGAGGTTCTTGTGGAGCTTGCCTCTCTTCAGACATCCTTCCTCACACTAGATAAGGCGATCAAGACCACAAACCGGAGGGTTATTGCCCTTGAGAATGTGGTGAAGCCTAGGTTGAAGAATACCATTAGTTACATTAAGGGAGAGTTGGATGAGCTAGAAAAGGAGGATTTCTTTAGGTTGAAGAAGGTCCAAGGATATAAGAAGAGGGAAATTGAGAAGCGGATGCAATCTGCCAAGTTGTTCGCTGAGGAACAGGTTGCTGAGAAGCTTGCATTGTGGAGAGGTATTTCGCTGAATAATGCTCAAAACATCTTGTCTGCAACGGCCCAGAAAGACGAGGATATCATTTTCTGA 699 0.4878 MLGQTQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTAKYVAGDNIKYVVLENVREASLKVRSRQENVAGVKLPKFEYTNDGEVNKNDLTGFARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDKAIKTTNRRVIALENVVKPRLKNTISYIKGELDELEKEDFFRLKKVQGYKKREIEKRMQSAKLFAEEQVAEKLALWRGISLNNAQNILSATAQKDEDIIF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212276g00002 232 Gene3D - 2 44 - -
Stsc212276g00002 232 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 45 IPR002699 GO:0046961
Stsc212276g00002 232 Coils Coil 150 170 - -
Stsc212276g00002 232 Gene3D - 45 191 - -
Stsc212276g00002 232 Pfam ATP synthase subunit D 45 179 IPR002699 GO:0046961
Stsc212276g00002 232 NCBIfam V-type ATP synthase subunit D 43 183 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212276g00002 Stsc-Chr212276 7674 8465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212276g00002 1 232 Primary Pumps ATPases(2) AT3G58730 68.702 2.29e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212276g00002 K02149 - qsa:O6P43_017942 382.489