Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212267g00006 ATGGCTAATGAACCTGACTACGACAGCAGCTCCTCCTCCGTCACCACCACCACCACCCTCCCTGAATCCACCAGGAGCTGGATCAGCTTCACCAGCCTCCGCCGCCAGAGCTCCGTCTCCGTTTTCTCTACCTCCTCAGCCATCACAGACACACCTTTGTTCCTCACTACTCCTTCTTCTTCTTCCCTCCAAGCCAAGCCACACAAGGCCAACCAAGTTGCATGGGAGGCCATGCAGCGGCTCCTCAGCCACCACGGCCGAGTGGGGCTGGACCACTTCCGGCTTCTGAGGCGGCTGGGGAGCGGCGACATAGGCAACGTGTACCTTTGCCAGATAAGGAACCCTGTGGTGGGGCTTCCACAGTGCTTCTACGCCATGAAGGTTGTGGACAGAGAAGCACTTGCCATTAGGAAGAAGCTTCATAGAGCTGAGATGGAGAAAGAGATTCTTGGAATGCTTGATCACCCTTTCTTGCCAACTTTATACACTCAGTTTGACGCTTCTCATTACTCTTGCTTGCTCATGGAGTTCTGCCCCGGCGGCGACCTTTACGCCGCTCGCCAACGCCAGCCTAGCAAGCGCTTTTCCATCGCTTCCGCCAAGTTTTATGGAGCGGAGACCCTTTTGGCGGTAGAATATCTTCACATGATGGGGATAGTGTACAGAGATTTGAAGCCGGAGAACGTTCTGGTTAGAGAAGACGGCCACATAATGCTATCGGATTTCGATCTCTCTCTCAAATGCGACGTCGTTCCAAAGCTCTTAAGGACGAAAACCACCACCACCACATTCCAACGCACCATTAAAACCACAAAGACTAGCAGATCACCTTCCTGCGCCTTACCCATCCAGCCAGTACTCTCATGCTTCTCGCTATCTTCATCAAGAAACAAGAAACGCTCCCCGACAGTTACAACCGTCATAACAGAAAACGCTAATAACAACAACGAAGTAACCGAGGAGCTAGATCCAGATCCAGAGCTTGTTGCCGAGCCAATAGAAGCAAAGTCGAAATCGTTCGTCGGAACGCACGAGTATTTGGCGCCGGAAGTGATCTTAGGTCAGGGACATGGCAGCGCCGTGGATTGGTGGACGTTTGGGGTGTTCTTGTACGAGATGCTGTACGGAAGAACGCCGTTCAAAGGGGAGAACAACGAGAAGACGCTGGTGAATATTCTGAAGATGCCGTTGGTTTTTCCAAGGATTGCGGTTAGTAGTAGCAAGGAGTATGAGGAGATGGTGAAGGTTCAAGATCTGATAAGCAAGCTTCTTGTGAAGAATCCAAGCAAGAGGATTGGGAGTTGCATGGGTTCTGTTGAGATTAAGAGGCATGAGTTCTTTAAGGGTGTTAATTGGGCTTTGATTAGGTCTATTAAGCCACCTGAGGTGCCTAATAATCATATCAATAATAACATGCTTAGGAGTAGGGTTTTGATGCCTAGACTTACCAAGAAAGAATTAGATCAACCCTATAAGCTTAGTCATCATCATCATCATTTTGAATACTTCTAA 1512 0.4954 MANEPDYDSSSSSVTTTTTLPESTRSWISFTSLRRQSSVSVFSTSSAITDTPLFLTTPSSSSLQAKPHKANQVAWEAMQRLLSHHGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLHRAEMEKEILGMLDHPFLPTLYTQFDASHYSCLLMEFCPGGDLYAARQRQPSKRFSIASAKFYGAETLLAVEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRTKTTTTTFQRTIKTTKTSRSPSCALPIQPVLSCFSLSSSRNKKRSPTVTTVITENANNNNEVTEELDPDPELVAEPIEAKSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKMPLVFPRIAVSSSKEYEEMVKVQDLISKLLVKNPSKRIGSCMGSVEIKRHEFFKGVNWALIRSIKPPEVPNNHINNNMLRSRVLMPRLTKKELDQPYKLSHHHHHFEYF 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212267g00006 503 Pfam Protein kinase domain 94 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212267g00006 503 Pfam Protein kinase domain 336 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212267g00006 503 Gene3D Transferase(Phosphotransferase) domain 1 178 249 - -
Stsc212267g00006 503 FunFam serine/threonine-protein kinase D6PK-like 335 465 - -
Stsc212267g00006 503 FunFam protein kinase PINOID 2 91 177 - -
Stsc212267g00006 503 PANTHER FLIPPASE KINASE 1-RELATED 31 469 - -
Stsc212267g00006 503 Gene3D Phosphorylase Kinase; domain 1 91 177 - -
Stsc212267g00006 503 Gene3D Transferase(Phosphotransferase) domain 1 335 465 - -
Stsc212267g00006 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Stsc212267g00006 503 SMART serkin_6 93 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212267g00006 503 ProSiteProfiles Protein kinase domain profile. 93 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212267g00006 503 SUPERFAMILY Protein kinase-like (PK-like) 70 474 IPR011009 -
Stsc212267g00006 503 CDD STKc_phototropin_like 91 464 - -
Stsc212267g00006 503 FunFam protein kinase PINOID 178 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212267g00006 Stsc-Chr212267 22316 24004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212267g00006 3 503 AGC Kinase Gene Family AT2G26700 58.118 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc212267g00006 Pkinase 1.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212267g00006 K08286 - gmx:100777988 714.531