Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212247g00002 ATGACTAGCTACCCTTGGAACTACTCAGATGATCCTTGCTTTGATGATGATGGAAAATGGGCCACTAAGCTTCTTATGGAGTGTGCTAGAGCAATCAATGATAGAGACTCAAGCAAAATCCAACACCTTCTATGGATGCTAAATGAATTAGCTTCCCCTTATGGAGATTCTGAGCAGAGACTAGCCTCATATTTTCTTCAAGCTCTGTTCTGCAACACCACTCAAACCGGCGAAAGATGCTACAGGACTCTTAAATCAGTATCTGAAAAGAACCAATCCTTTGATTCAGCAAGAAAAATGATACTCAAATTTCAAGAGGTAAGTCCATGGACAACTTTTGGACATGTAGCTTCAAATGCTGCAATCTTGGAAGCCTTTTTAGAAACAGGAGAGGAAAACAGAAAGAAGAAGCTTCACATCATTGACATAAGCAACAACACTAGCACACTTTGCACTCAATGGCCTACTTTCTTGGAATCTTTGGCTACTAAGACCAGTGTTCATGTTGAAACCCCTCAAGTGAAGCTCACAATTGTGTTGGTGAAAGAAAGCTTAAAAGGGTCAGTGATGAATGAAATTTGTCAGAGAATGGAGAAGTTTGCAAGGCTAATGAGAGTGCCCTTTGAGATTAACATGATAAATGGAGTGGAACATCTATGGATGGTGACAAAAGAAAAGTTAGGAGTAGTTGAAGAAGAAGAAGAAGATGATGAGGCTATTATTGCTGTGAACTGTGCTGGGGGATTGAGGGGAGTTGAGAAGGGAAAAAGGGGTAATGTGATTGGAATGTTGAAGTCTCTTAATCCAAGAATTGTGACAATTGTTGAGGAAGAAGGTGGTGGTAGTGGTGATTCTTGCATCACAAGAAATGATGATGATAGTGATGATAATTTTGTGAAGTGCTTTGAAGAGTGTTTAAGGTTTTACAAGATTTACTTTGATATGTTAGAGGAGAGTTTTGCAACAATAAGCAATGAGAAATTGATGCTAGAGAGGGAGTGTTCAAGAGACATACTTAGTGTTTTGAGTTGCAATGATAATAATAGTAGTGATGATCATAGAAGGGAGAGAGGAGTAGAGTGGTCTATGAGGTTTAGGGAGTATTTTACTCCAATAAATTTGAGTGATGATGTTGTTGATGATGTTAAGGCATTGATCAAGAGATATAATAGATCAAGGTGGTCATTGATGATGCCATCATCATCATTATCATCATCATCATCATCGTCATCATCATCACAAGTAGAAGGAATTTACTTGAAATGGAGTGATGAACCTGTTCTTTGGGCTTCAGCTTGGAAATAA 1305 0.3847 MTSYPWNYSDDPCFDDDGKWATKLLMECARAINDRDSSKIQHLLWMLNELASPYGDSEQRLASYFLQALFCNTTQTGERCYRTLKSVSEKNQSFDSARKMILKFQEVSPWTTFGHVASNAAILEAFLETGEENRKKKLHIIDISNNTSTLCTQWPTFLESLATKTSVHVETPQVKLTIVLVKESLKGSVMNEICQRMEKFARLMRVPFEINMINGVEHLWMVTKEKLGVVEEEEEDDEAIIAVNCAGGLRGVEKGKRGNVIGMLKSLNPRIVTIVEEEGGGSGDSCITRNDDDSDDNFVKCFEECLRFYKIYFDMLEESFATISNEKLMLERECSRDILSVLSCNDNNSSDDHRRERGVEWSMRFREYFTPINLSDDVVDDVKALIKRYNRSRWSLMMPSSSLSSSSSSSSSSQVEGIYLKWSDEPVLWASAWK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212247g00002 434 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 403 IPR005202 -
Stsc212247g00002 434 Pfam GRAS domain family 22 434 IPR005202 -
Stsc212247g00002 434 ProSiteProfiles GRAS family profile. 12 434 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212247g00002 Stsc-Chr212247 5998 7302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212247g00002 12 434 GRAS Transcription Factor Family AT4G37650 44.954 3.08e-120 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc212247g00002 GRAS 4.5e-74 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212247g00002 - - adu:107477059 680.248