Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212241g00004 ATGCTGAAATCCAAGTTTCTTCACACTGTTCTACTACTTTTGATTTTCTGTGCTAAACACGCCAAAGCAGAAAACAACAAAGAACAATCCAAAAACACATACATAGTTCACATGGACAAATCTACCATGCCAGCAACTTTCAGTGATCACCAATATTGGTATGAATCATCATTGCAATCAGTCTCAGAATCAGCAGAGGTGTTATACACCTACAAGCATGTAGTCCATGGATTCTCAACAAGGCTAACTAACCAAGAAGCCGACGCGCTCTTGGAACAACCGGGAATTCTTTCGATCATACCGGATCGCAAATACGAGCTTCACACAACAAGAACACCATACTTCCTTGGATTGGAAGTAACTCTTGCAAGTTTGGATAGATTAAGCACCAATTTACCTGCCTCTGTGAAAGAGAGTGAGGTAATTATTGGAGTATTAGACAGTGGTATATGGCCTGAGCATGAGAGCTTGGATGACACTGGATTTGGCCCAATTCCAAATAGATGGAAAGGTGAATGTGAATCTGGAAAGAACTTCAATTCATCACACTGTAACAGGAAACTTATTGGTGCAAGGTTCTTTTACAAAGGGCATGAAGGAGTTGCTGGTCCTATTAACGAAGAGAAGGAATCAAAGTCACCAAGGGATGATCAAGGCCATGGAACTCACACCTTAACTACAGCAGCCGGTTCCTTAGTCTCCGGAGCGAGCCTCTTCGGCTTAGCTCCGGGGACAGCCAGAGGCATGTCTCCACAAGCTCGTGTAGCATCTTACAAGGTATGCTGGCATAAAGGTTGTTACTCCTCAGACGTGGCCGCCGCCATCGACAAGGCCATAGAAGATGGCGTGGATATCCTCTCCATGTCACTAGGCTCCGATCTACAAGAATACTACAAAGATCTTACTGCAATTGGTGCTTTCATAGCCAACTCCCATGGAATTCTTGTCTCCATTTCGGCCGGAAATAGCGGCCCGGTTCCAGGACAAATATCTAATGTAGCACCATGGATGTTAACCATCGGAGCCGGTACCTTAGACCGCGATTTCCCGGCCTATGTTACCCTTGGAAACGGGAATACATACACCGGATCATCACTCTACAGGGGAGTGTCCTTACTCGACACTCCCCTGCCTCTGGTTTATGCCGGTAACGTTAGCAATAACTCATCTCAGGAATTTAACTGTGAGATGAATACACTGATCCCGGCTCGAGTAGCCGGGAAGATTGTCCTATGCAAGAGAGGAGGCAACGGAAGAGTTGCGAAGGGATTAGAAGTGAAGAGAGCTGGTGGGATTGGAATGCTTTTAGGGAACACTAAACAGCATGGAGAGGAGTTACTTGCAGATCCACACGTTCTTCCTGCAGCATCGTTGGGACAGAAAGCGAGTGATGAAATAAGAGACTATATTTTGTCTTCTCCAAATGCAACTGCTACGGTTTCTTTTTTAGGGACTCATCTACAGGCTCAGCCTTCTCCGGTGGTGGCAGCCTTCAGCTCCAGAGGACCGAATCCTCTGACGCCGAAGGTGCTCAAACCGGACCTGATCGGACCGGGGGTTAACATTCTTGCCGGATGGACTGGAGCAAATGGACCATCTGGTTTGGAAGAAGACACTAGGCGCACCAGCTTCAATATTATGTCCGGTACATCAATGTCATGCCCTCATATAAGTGGTTTAGCAGCTATACTTAAGGCAGCACACCCTGAATGGAGCCCTGCTGCAATAAGATCTGCCCTTATGACAACATCATACACAACATACTCAAATGGGAACCCTATACTGGACATTGCCACACAAAAACCAGCTTCACCCTTTGACTTTGGGGCTGGACACGTGGATCCACTACAAGCACTTGATCCTGGCCTTGTCTATGATGCAGATTTACATGACTACCTCAACTTCCTCTGTGCCTTAAACTACAATCAATCTCAAACTAAGGTTGTTGCTAGAAGAGACTTTACTTGTGACCCAAGAAAGATCTATAGGGTTGAAGATCTTAACTACCCTTCTTTTGCTGTTCCTTTTGAATCTAAAAATGCATCCACCAGTGTTCAATATACAAGGACATTAACAAATGTGGGCACCCCAGGAACATATAAAGCTTCAGTGTCATTCCAATCAGAGTCATTAGTAAAAATTATGGTTGAACCAGAAACACTTAGTTTTACTAAATTGTTTGAGAAGAAAAACTACACTGTGACATTCACATCTTCTAATTCTGTTCCTTCCGGCACAAAAAGCTTTGCTTACCTGAAATGGTCAGATGAAAAGCATAAGGTTGTTAGTCCAATTGCATTCAGCTGGTTGGATTAG 2316 0.4478 MLKSKFLHTVLLLLIFCAKHAKAENNKEQSKNTYIVHMDKSTMPATFSDHQYWYESSLQSVSESAEVLYTYKHVVHGFSTRLTNQEADALLEQPGILSIIPDRKYELHTTRTPYFLGLEVTLASLDRLSTNLPASVKESEVIIGVLDSGIWPEHESLDDTGFGPIPNRWKGECESGKNFNSSHCNRKLIGARFFYKGHEGVAGPINEEKESKSPRDDQGHGTHTLTTAAGSLVSGASLFGLAPGTARGMSPQARVASYKVCWHKGCYSSDVAAAIDKAIEDGVDILSMSLGSDLQEYYKDLTAIGAFIANSHGILVSISAGNSGPVPGQISNVAPWMLTIGAGTLDRDFPAYVTLGNGNTYTGSSLYRGVSLLDTPLPLVYAGNVSNNSSQEFNCEMNTLIPARVAGKIVLCKRGGNGRVAKGLEVKRAGGIGMLLGNTKQHGEELLADPHVLPAASLGQKASDEIRDYILSSPNATATVSFLGTHLQAQPSPVVAAFSSRGPNPLTPKVLKPDLIGPGVNILAGWTGANGPSGLEEDTRRTSFNIMSGTSMSCPHISGLAAILKAAHPEWSPAAIRSALMTTSYTTYSNGNPILDIATQKPASPFDFGAGHVDPLQALDPGLVYDADLHDYLNFLCALNYNQSQTKVVARRDFTCDPRKIYRVEDLNYPSFAVPFESKNASTSVQYTRTLTNVGTPGTYKASVSFQSESLVKIMVEPETLSFTKLFEKKNYTVTFTSSNSVPSGTKSFAYLKWSDEKHKVVSPIAFSWLD 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212241g00004 771 Pfam PA domain 378 465 IPR003137 -
Stsc212241g00004 771 Gene3D Peptidase S8/S53 domain 141 632 IPR036852 GO:0004252|GO:0006508
Stsc212241g00004 771 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Stsc212241g00004 771 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Stsc212241g00004 771 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Stsc212241g00004 771 MobiDBLite consensus disorder prediction 204 219 - -
Stsc212241g00004 771 Pfam Fibronectin type-III domain 666 766 IPR041469 -
Stsc212241g00004 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Stsc212241g00004 771 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Stsc212241g00004 771 CDD PA_subtilisin_like 352 480 - -
Stsc212241g00004 771 Gene3D - 636 769 - -
Stsc212241g00004 771 Gene3D - 346 488 - -
Stsc212241g00004 771 SUPERFAMILY Subtilisin-like 108 623 IPR036852 GO:0004252|GO:0006508
Stsc212241g00004 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 766 IPR045051 -
Stsc212241g00004 771 CDD Peptidases_S8_3 105 585 IPR034197 -
Stsc212241g00004 771 Pfam Subtilase family 139 609 IPR000209 GO:0006508|GO:0008236
Stsc212241g00004 771 MobiDBLite consensus disorder prediction 204 225 - -
Stsc212241g00004 771 FunFam Subtilisin-like protease SBT1.5 140 356 - -
Stsc212241g00004 771 FunFam subtilisin-like protease SBT1.5 346 487 - -
Stsc212241g00004 771 ProSiteProfiles Serine proteases, subtilase domain profile. 119 619 - -
Stsc212241g00004 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 108 IPR037045 -
Stsc212241g00004 771 FunFam Subtilisin-like protease SBT1.9 22 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212241g00004 Stsc-Chr212241 21270 25069 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212241g00004 2 769 Subtilisin-like Serine Gene Family AT5G67360 59.635 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212241g00004 - - gmx:100793808 1050.43