Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212241g00001 ATGAAGATACTGATATTGAAGTTTCTTCAGGTTTTTTTGCTGCTGATTTTCTATGGCAGATACACCATGGCTGAAAAGGAAACACAAGAAGCCAAAAAAACATACATAGTTCACATGGACAAGTTCAACATGCCAGAAAGTTTCAGTGATGATCACCTGAGTTGGTATGATTCATCACTGAAATCAGTGACAGATTCAGCAGAGATGCTATACACATACAAGCATGTAGCTCATGGATTCTCCACAAGGCTAACCACCCAAGAAGCCGAAACACTCTCGAAACAACCGGGGATTCTTTATGTCATGCCTGAAGTTAGATACGAGCTTCACACAACAAGAACACCACAGTTTCTTGGATTGGATAAGGCTACAACAGTTTTACCTGCTTCTAGCCATCAGCAGAGCCAGGTGGTTATTGGAGTGCTAGACACCGGTGTTTGGCCGGAGCTGAAGAGCTTGGATGACACCGGACTCGGACCGGTCCCGAGTGGCTGGAAAGGTGAGTGTGAAATTGGAAACAACTTCAATTCATCAAGCTGTAACAGAAAACTTGTTGGTGCAAGGTTTTTCGCCAAAGGGTATGAAGCAGCACTTGGACCTATTGATGGGAAGACAGAATCAAGGTCACCAAGGGATGATGATGGCCATGGAAGTCATACCTTAACTACGGCAGGAGGATCACCAGTCCAAGGAGCAAGCCTTTTCGGCTTGGCTTCAGGGACAGCAAGAGGGATGGCTCCACAAGCTCGTGTGGCGGCTTACAAGGTATGCTGGCTTGGTGGATGCTTCTCTTCTGACATAGCCGCTGGAATCGACAAGGCCATAGAAGATGGTGTCAATGTCCTATCCATGTCTATTGGGGGAACTTCAATGGACTACTACAGAGATATCATTGCCATTGGTGCTTTCACAGCCACATCCCATGGAATTCTTGTTTCCACTTCAGCAGGTAATGGAGGGCCTAGTCCAGGAAGCTTGTCTAATGTAGCACCATGGATAACCACCGTGGGAGCCGGTACCATAGACCGCGATTTTCCGGCCTATATCAACCTTGGAAACGGGAAGACACATACTGGGGCCTCACTTTACAGTGGAAAATCTTTATCTGATTCTCCAATACCACTTGTTTATGCTGGTAATGTAAGCAATTCATCAGTGGGATACCTTTGCATACCAGAAAGCTTGATTCCCTCAAAAGTTGCTGGCAAAATCGTGATATGCGAAAGAGGAGGAACTCCAAGGGTGGAAAAGGGTCTAGTTGTGAAGAAAGCTGGAGGCCTTGGGATGATCTTAACAAACAGTGAAGAATATGGTGAAGAGCTTGTTGCTGATCCCCATCTCCTCCCTGCAGCATCATTAGGCCAAAAATCCAGTGAGGCTGTAAAAAGCTATGCTTTCTCCTCTCCAAATCCCACAGCTACAATTACTTTTGTAGGCACTCAGTTGCAAGTTCAACCGTCTCCGGTGGTGGCAGCATTCAGCTCTAGAGGGCCAAATTTTCTCACACCAAAGATACTCAAACCAGACCTTATAGCTCCCGGAGTTAACATCATTGCTGGGTGGACTGGAGCAGTGGGACCGACTGGTTTGACAGTTGATACTAGGCATGTGAACTTTAACATAATCTCGGGTACATCCATGTCATGCCCTCATATAAGTGGTTTAGCTGCTATCATCAAGGGAGCGCACCCGGAATGGAGCCCGGCCGCCATAAGGTCTGCACTCATGACCACAGCCTATAGAGCGTACAAAACTGGGAAAACAATTGAAGATATTGCTACCGGACAACCAGCAACACCCTTTGATTATGGTGCTGGACATGTGGATCCAGTGGCAGCTCTTGATCCTGGTCTTGTCTATGATGCAAACATAGATGACTACCTTAGCTTCTTCTGTGCCTTGAATTACACTCAATTCCAAATTAAGCTTGCGGCGAGAAGAGACTTTACTTGCGATTCAAGGAAGAACTACAGGGTGGAAGACTTCAACTACCCCTCTTTTGCAGTTCCCTTGGAAACAGCTTCAGGAATCGGAGGAGGTTCCAATGCACCCACCTCCGTCCAATACAAAAGAATTCTAACTAATGTGGGGAGTGGAGGAACATATAAAGCTTCAGTGTCATCCCTTTCTCCCTCGGTGAAAATCGTGGTTGAACCGGAGACACTTAGCTTCACTCAATTGTACGAGAAGAAGAGCTACACGGTGACATTTACATCTCCTTCGATGCCTTCCGGCACAAATAGCTTTGCTTATCTGGAATGGTCAGATGGAAACCATAAGGTTGTTAGTCCAATAGCAATCAGCTGGATATGA 2313 0.4622 MKILILKFLQVFLLLIFYGRYTMAEKETQEAKKTYIVHMDKFNMPESFSDDHLSWYDSSLKSVTDSAEMLYTYKHVAHGFSTRLTTQEAETLSKQPGILYVMPEVRYELHTTRTPQFLGLDKATTVLPASSHQQSQVVIGVLDTGVWPELKSLDDTGLGPVPSGWKGECEIGNNFNSSSCNRKLVGARFFAKGYEAALGPIDGKTESRSPRDDDGHGSHTLTTAGGSPVQGASLFGLASGTARGMAPQARVAAYKVCWLGGCFSSDIAAGIDKAIEDGVNVLSMSIGGTSMDYYRDIIAIGAFTATSHGILVSTSAGNGGPSPGSLSNVAPWITTVGAGTIDRDFPAYINLGNGKTHTGASLYSGKSLSDSPIPLVYAGNVSNSSVGYLCIPESLIPSKVAGKIVICERGGTPRVEKGLVVKKAGGLGMILTNSEEYGEELVADPHLLPAASLGQKSSEAVKSYAFSSPNPTATITFVGTQLQVQPSPVVAAFSSRGPNFLTPKILKPDLIAPGVNIIAGWTGAVGPTGLTVDTRHVNFNIISGTSMSCPHISGLAAIIKGAHPEWSPAAIRSALMTTAYRAYKTGKTIEDIATGQPATPFDYGAGHVDPVAALDPGLVYDANIDDYLSFFCALNYTQFQIKLAARRDFTCDSRKNYRVEDFNYPSFAVPLETASGIGGGSNAPTSVQYKRILTNVGSGGTYKASVSSLSPSVKIVVEPETLSFTQLYEKKSYTVTFTSPSMPSGTNSFAYLEWSDGNHKVVSPIAISWI 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212241g00001 770 CDD PA_subtilisin_like 348 475 - -
Stsc212241g00001 770 Pfam Subtilase family 135 606 IPR000209 GO:0006508|GO:0008236
Stsc212241g00001 770 FunFam Subtilisin-like protease SBT1.5 136 351 - -
Stsc212241g00001 770 CDD Peptidases_S8_3 107 580 IPR034197 -
Stsc212241g00001 770 Gene3D Peptidase S8/S53 domain 137 627 IPR036852 GO:0004252|GO:0006508
Stsc212241g00001 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 110 IPR037045 -
Stsc212241g00001 770 Pfam Peptidase inhibitor I9 34 110 IPR010259 -
Stsc212241g00001 770 SUPERFAMILY PA domain 374 436 IPR046450 -
Stsc212241g00001 770 FunFam Subtilisin-like protease SBT1.9 23 110 - -
Stsc212241g00001 770 MobiDBLite consensus disorder prediction 201 227 - -
Stsc212241g00001 770 Gene3D - 342 483 - -
Stsc212241g00001 770 Pfam Fibronectin type-III domain 661 767 IPR041469 -
Stsc212241g00001 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 766 IPR045051 -
Stsc212241g00001 770 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Stsc212241g00001 770 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Stsc212241g00001 770 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Stsc212241g00001 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Stsc212241g00001 770 ProSiteProfiles Serine proteases, subtilase domain profile. 106 614 - -
Stsc212241g00001 770 SUPERFAMILY Subtilisin-like 109 618 IPR036852 GO:0004252|GO:0006508
Stsc212241g00001 770 Pfam PA domain 387 459 IPR003137 -
Stsc212241g00001 770 Gene3D - 631 769 - -
Stsc212241g00001 770 FunFam subtilisin-like protease SBT1.5 342 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212241g00001 Stsc-Chr212241 7066 9999 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212241g00001 12 769 Subtilisin-like Serine Gene Family AT5G67360 63.636 0.0 987
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212241g00001 - - gmx:100793808 1246.88