Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212235g00002 ATGGCGGCGCAGCCTCTCGAGCAGGTCCAATGCTTTGGTCGTAAGAAAACGGCGGTTGCGGTTACCTACTGCAAGCGCGGCCGCGGCCTAATCAAGATCAATGGCTGCCCAATTGAACTGGTTGAGCCTGAGATTCTACGGTTCAAGGCCTTCGAGCCGATTCTTCTGTTGGGGCGAAGCCGCTTCGCCGGCGTCGACATGCGCATCCGCGTCAAGGGAGGTGGACACACTTCTCAGATCTATGCCATAAGGCAGAGCATAGCGAAGGCGCTCGTTGCGTTCTACCAGAAGTATGTTGATGAACAGAGCAAGAAGGAGATCAAGGACATTCTCGTCAGGTACGATAGGACCTTACTTGTTGCTGATCCAAGGCGCTGCGAGCCTAAGAAGTTCGGTGGTCGTGGTGCTCGCGCAAGGTTCCAAAAATCTTACCGTTAG 438 0.5457 MAAQPLEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212235g00002 145 PANTHER RIBOSOMAL PROTEIN S9 7 142 IPR000754 GO:0003735|GO:0005840|GO:0006412
Stsc212235g00002 145 Pfam Ribosomal protein S9/S16 13 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
Stsc212235g00002 145 FunFam 40S ribosomal protein S16 1 145 - -
Stsc212235g00002 145 Gene3D - 1 145 IPR014721 -
Stsc212235g00002 145 ProSitePatterns Ribosomal protein S9 signature. 73 91 IPR020574 GO:0003735|GO:0005840|GO:0006412
Stsc212235g00002 145 SUPERFAMILY Ribosomal protein S5 domain 2-like 8 145 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212235g00002 Stsc-Chr212235 9438 9875 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212235g00002 1 145 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 87.671 4.83e-93 264