Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212231g00004 GGACATGTGGAGAGACAAGTACTCGTAGAGGATTATGAGATTGGAAAAGTGGTTGCTTTTGAACAAAAGCCTCAGAATCTGAAAGAGATCTACACAGCAGATGGACGGAAAATATTTTCTCGAGGTGGTGTGGAGACTGCTATTCCACTAAAGCGGTACGGTCCTGGTCGTCTACGTAGTTCTTTTGAAGATCATATTAAGGATCTTCAAAGTAAGGCATCTGCTGAACAAAATGCGGCTAATGAAGGTAAAAGTAGTAAACGACAGGCAGAGATCCAACTTGGGCACCTACAATCTGAACTGACTTCTGTAAAGAGGCGTTGTGAAAATGTTGGAAGAAGTTTATCTTACAAGAAGCTAGCTTTGGAGGAGGCAATGCATCAGCAGGCTGCTGAAAATAGCTCAATTCCTTCCTCATCATTTGAGGCGCTTGATGTAGACATCACAGAACTCAGGAAGAAACTAGAAGAAGAACAAGTATTGTTGAAAGCCCTTCGACAAAGGAAGGATGAAGCATCAGGGAAAGCAAAGGATCTTAAAGTAAAAGTAGACAAGCTGCATGATGCAGCAAAGGAGGAACTTGATGCCATGGAAAAAGCTGAGATTCAGTGCCGTAAGATGGAAAATGAACTGAATTCAGCTGAACAGGGAAAGGCTCACTATGAAATTCTCATGGGAAACAATGTCCTACCTGCTATTAAGAAGGCTGAGGAAGAATATCAAAACCTTACAAAAGAGCGTGAGGAGAATGCTAAAAAGGCTTCCATAATTTGCCCTGAGAATGCAGTCAATGATTGTGACTCGTTAGGAGATTCTGTTATGAAAACCCCAGCACAAATCAGCACTGAATTAGAAGAACTAAATTGGAAAGTTGAGCATGAGTGCCGTAGGCATGTTGTCATCATTCTGCTCCATGTTATCATGCACTCTGAACCAGTTGCTGATCTGAGGATGCTTTATGAGAAAAAAGAACGTAAGATTAAGAAGAGGCAGCAAGCATACAAAGCTCTTCGAGAAAAGTTGGTTGCATGCCAGAAAGCCTTAAAGATACGACGGATCAAGTTTGAGACGAATGCAAATCGTCTGAAGCAACAGCTTTCTTGGAAATTTAATGATCATTTGAGGAAGAAAGGGATCAGCGGACATATTAAAGTTAATTATGACGAGAAAACCTTATCTATTGAGGTCCAAATGCCTCAGGATGCATCAAACAGAGCTGTTCAAGACACCAGGGGGCTTTCAGGTGGGGAGCGTTCTTTTTCAACATTATGTTTTGCATTAGCCCTTCATGAAATGACAGAATCCCCTTTCAGAGCAATGGATGAATTCGATGTCTTTATGGATGCAGTAAGCCGAAAAATCAGCTTAGACACACTGGTTAATTTTGCTGTGGCACAAGGATCCCAGTGGCTATTTATCACACCCCATGATACCAGCATGGTGAAGCCTGAACCTAAGGTACGAATGCTGCAAATGCGACCTCCCCGTTCTTGA 1494 0.421 GHVERQVLVEDYEIGKVVAFEQKPQNLKEIYTADGRKIFSRGGVETAIPLKRYGPGRLRSSFEDHIKDLQSKASAEQNAANEGKSSKRQAEIQLGHLQSELTSVKRRCENVGRSLSYKKLALEEAMHQQAAENSSIPSSSFEALDVDITELRKKLEEEQVLLKALRQRKDEASGKAKDLKVKVDKLHDAAKEELDAMEKAEIQCRKMENELNSAEQGKAHYEILMGNNVLPAIKKAEEEYQNLTKEREENAKKASIICPENAVNDCDSLGDSVMKTPAQISTELEELNWKVEHECRRHVVIILLHVIMHSEPVADLRMLYEKKERKIKKRQQAYKALREKLVACQKALKIRRIKFETNANRLKQQLSWKFNDHLRKKGISGHIKVNYDEKTLSIEVQMPQDASNRAVQDTRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVNFAVAQGSQWLFITPHDTSMVKPEPKVRMLQMRPPRS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212231g00004 497 Coils Coil 87 107 - -
Stsc212231g00004 497 Gene3D - 232 489 IPR027417 -
Stsc212231g00004 497 Coils Coil 148 224 - -
Stsc212231g00004 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 475 IPR027417 -
Stsc212231g00004 497 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 2 495 - -
Stsc212231g00004 497 Coils Coil 313 340 - -
Stsc212231g00004 497 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212231g00004 Stsc-Chr212231 16573 26436 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212231g00004 3 497 Structural Maintenance of Chromosomes family AT5G61460 50.101 9.15e-152 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212231g00004 K22804 - gmx:100816916 528.48