Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212224g00002 ATGCGGTCTATTCTTCTTCCTTTTGGAACCTCACTCTCTCCAACTCCTATTACACTAAACACCTCAAAAATCTCCCCTTTCACTCTTAATCTCAAGAGACCAACCAGTATTCCATCTTGGTCGTCTTCTTCTTCATCTTCACCCCATGAATTCTCACTCCTTTCTCTCTCCCAATCAGGATTATGCAGGGCCAGTCAAGTGGTTGATTTGTTCCCAACTGTGTCACCTGAAATCATAGTCCGAGAGGCGAGGTTAGAGGATTGTTGGGAAGTGGCAGAAACTCACTGCAGCTCCTTCTTCCCTGAGTATTCCTTCCCATTAGATTTTGTTCTGAGGATGGACAGATTGGTTGCTATGTTAGCCGGATTCTCCATACCGAGTGGCTGCAAAAGGACCTGTTTGGTTGCTGTTATCGGCAGCTCACTCCATCAAACTTTCTTGTTTGGAAGTGATGATGTCAAGATTGGTGGTTTTGAAGGGAAATTCAGCCTCAATAAGGGATATGTGGCTGGTATATTGACAGTAGATACTGTTGCAGACTTTCTACCCAGAAAGGGACCATTGAGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTGAGGGAAAAGTTTAGGCGAAAAGGAATAGCCAAACTATTGGTAGCGAAGGCAGAATCACAGGCCAAAAATTGGGGTTGCCGTGCTATCGCGTTGCACTGTGATTTGAAAAACCCTGTGGCCACCAAGTTATACCAAGGCCAAGGTTTCAAATGCATTAAGGTTCCAGAAGGAGCAACATGGCCTCAACCAAAGACATCACCTGATATTCAGTTCAACTTCATGATGAAGCTTCTTAACAATTCACCTGCTTCTGTATCTAATTAG 873 0.441 MRSILLPFGTSLSPTPITLNTSKISPFTLNLKRPTSIPSWSSSSSSSPHEFSLLSLSQSGLCRASQVVDLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMLAGFSIPSGCKRTCLVAVIGSSLHQTFLFGSDDVKIGGFEGKFSLNKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKLLVAKAESQAKNWGCRAIALHCDLKNPVATKLYQGQGFKCIKVPEGATWPQPKTSPDIQFNFMMKLLNNSPASVSN 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212224g00002 290 CDD NAT_SF 194 235 - -
Stsc212224g00002 290 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 78 283 IPR000182 GO:0016747
Stsc212224g00002 290 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 78 279 - -
Stsc212224g00002 290 Pfam Acetyltransferase (GNAT) family 167 252 IPR000182 GO:0016747
Stsc212224g00002 290 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 77 258 IPR016181 -
Stsc212224g00002 290 Gene3D - 73 265 - -
Stsc212224g00002 290 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212224g00002 Stsc-Chr212224 11061 13631 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc212224g00002 Acetyltransf_1 3.8e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212224g00002 - - adu:107467912 536.569