Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212177g00004 ATGGAACACAAAATAAGAGGAAGAAGAAGCACTTCATCATGTCTTGTTCTTATCCTCTTCATCATCATCACAGTTTGTTCTTCTTCAGGATCCTTTGTTGATGCTTACAAGAATTACACAGTTGGAGATTCTTTAGGGTGGATTGATAGCACCATGAATTCTGATATCAATTACCAGAAATGGGCTTCCAATAAAGTTTTCAGCTTGGGTGATTTCCTAATTTTCAACACAGACACTAACCATTCAGTTGTCCAAACATACAATGCAACAACATACAAACAATGTGACTATGATGATGCACAAGACAAAGACACAATCCAATGGCTACAATCAAATCCATCAAACACAGAAACACATTCAATGACAGTTTCAGTTCCATTGAAGAAGGAAGGTGTCACTTACTTCTTCTCAAGTGACTATGATGGTGATCAATGCAAAAGTGGACAAAGATTCCAAATCAATGTCACTCATGGACAAGGTTTACCTAAGAGCCTTAAGGATCCTTCAGAAGATTCTGCTCCTTCTCCTTCTGGTGCCGCTGGTGGTGGTGTCGCCGGCGATGATGATGCGGCACCAGATACTATTGTTCCTGCGAATTTTAATCACCCCAAGTATGAAAATAGTGATAGTAGCGATGACGATGACAATGATAATGCTAGTGGAAAAGGAAAAGCTAGTTCTGATTCCGTGTCGATTTATGAACAAGTACGCATGAAATTATTCGGGTTTCTTATTTTGTTAGGAGTTGTTTTCTTGATATAA 762 0.3871 MEHKIRGRRSTSSCLVLILFIIITVCSSSGSFVDAYKNYTVGDSLGWIDSTMNSDINYQKWASNKVFSLGDFLIFNTDTNHSVVQTYNATTYKQCDYDDAQDKDTIQWLQSNPSNTETHSMTVSVPLKKEGVTYFFSSDYDGDQCKSGQRFQINVTHGQGLPKSLKDPSEDSAPSPSGAAGGGVAGDDDAAPDTIVPANFNHPKYENSDSSDDDDNDNASGKGKASSDSVSIYEQVRMKLFGFLILLGVVFLI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212177g00004 253 ProSiteProfiles Phytocyanin domain profile. 37 157 IPR003245 GO:0009055
Stsc212177g00004 253 PANTHER BLUE COPPER PROTEIN 37 177 IPR039391 GO:0009055
Stsc212177g00004 253 MobiDBLite consensus disorder prediction 158 227 - -
Stsc212177g00004 253 Gene3D - 35 158 IPR008972 -
Stsc212177g00004 253 Pfam Plastocyanin-like domain 52 149 IPR003245 GO:0009055
Stsc212177g00004 253 FunFam Early nodulin-like protein 18 36 158 - -
Stsc212177g00004 253 SUPERFAMILY Cupredoxins 37 156 IPR008972 -
Stsc212177g00004 253 CDD Phytocyanin 37 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212177g00004 Stsc-Chr212177 17749 20118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212177g00004 10 214 Phytocyanin Superfamily AT1G08500 57.073 1.08e-75 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212177g00004 - - ahf:112702128 386.341