Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212177g00003 ATGCCAGAAACTCTCTATCTGACCCTCAACATTGTTGATCGGTTCCTGTCCATGAGGGCTGTTCCAAGAAGGGAGCTTCAGCTGGTTGGCATAAGTTCAATGTTGATTGCATCTAAATATGAAGAAATCTGGGCTCCTGAGGTTAATGACTTTGTTCTCATATCAGACAATGCCTATATTAGAGAACAGGTTTTGGTCATGGAGAAAACAATCCTGAGAAAGCTTGAATGGTACCTAACCGTTCCCACACCCTATGTCTTCCTGGTTCGGTATATCAAAGCCTCCACCCCTTCTGATGATGAGGTATGTCTCTTTGTAGCTTCAAATATTGCATTGATACCAACCTGTGACTGA 354 0.4294 MPETLYLTLNIVDRFLSMRAVPRRELQLVGISSMLIASKYEEIWAPEVNDFVLISDNAYIREQVLVMEKTILRKLEWYLTVPTPYVFLVRYIKASTPSDDEVCLFVASNIALIPTCD 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212177g00003 117 PANTHER CYCLINS 1 108 IPR039361 -
Stsc212177g00003 117 Pfam Cyclin, N-terminal domain 2 79 IPR006671 -
Stsc212177g00003 117 SUPERFAMILY Cyclin-like 2 79 IPR036915 -
Stsc212177g00003 117 SMART cyclin_7 2 73 IPR013763 -
Stsc212177g00003 117 FunFam Cyclin-B1-4 1 80 - -
Stsc212177g00003 117 Gene3D - 1 80 - -
Stsc212177g00003 117 Gene3D - 81 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212177g00003 Stsc-Chr212177 8918 9440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212177g00003 1 102 Core Cell Cycle Gene Families AT2G26760 73.529 3.29e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212177g00003 K21777 - gmx:547782 185.652