Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212177g00002 ATGGCTTCTTCTATAGCTCTCGCTATCGATCAACAACAACAACAACAACAACACAGTGGTGAGAATGAGAAAAAGGTTATTGTGGCAGCAGCAGAAGGGAGGAACAATAGGCGTGCACTACAAGACATTGGTAATCTTGTGGCTAAGCAAGCAGAAAAGAATGTGTCCAAGCGCAACACAAAGAACATTTATGCTAATGACCAAGCTGCAACAGAGAAGAACAAGAAATCAAGCAGCAAACTTGTGAATGGAGCAGCAGTGGTTGGAGTGAGGAACTTCATTGCTACAACAAAGTTAGAAGCAGCTAAGAAACCAACAACAGAGAATGAAGTCATTGTCATCAGCTCAGATGATGAATCCGAGGATGAAAGGGAGAAGAAGCCCCAGGCTGCTAATGGAAGAAAGATAAGGGAAGGGGTAACCAGGGAAAATGCTAAGGCCTTCAGTTCAGTCCTCTCTGCTAGAAGCAAGGCTGCTTCTGGACTCGCTGTGCCAAAGAAACTGGTGGTGAACATTGATGCAACTGACATTGACAATGAATTGGCAGCAGTGGAGTACATTGATGACATCTACAAGTTCTACAAACTCACTGAAGATGATGGTCGTGTGTATGATTATATGGGTTCACAGCCTGATNNNNNNNNNNTGGACTGGTTGATAGAAGTCCATAGAAAATTTGAACTCATGCCAGAAACTCTCTATCTGACCCTCAACATTGTTGATCGGTTCCTGTCCATGAGGGCTGTTCCAAGAAGGGAGCTTCAGCTGGTTGGCATAAGTTCAATGTTGATTGCATCTAAATATGAAGAAATCTGGGCTCCTGAGGTTAATGACTTTGTTCTCATATCAGACAATGCCTATATTAGAGAACAGGTTTTGGTCATGGAGAAAACAATCCTGAGAAAGCTTGAATGGTACCTAACCGTTCCCACACCCTATGTCTTCCTGGTTCGGTATATCAAAGCCTCCACCCCTTCTGATGATGAGATGGAGAATATGGTGTTCTTCCTTGCTGAACTTAGTTTGTTGCACTATCCAACTATCATCTCCTATTGCCCTTCTGTGATTGCTGCTTCTGCTGTGTATACTGCAAGATGCACCCTTGAAAGGGTTCCTTCTTGGACTGAAACTCTTGAACACTACACAGGCTACTCTGAGGAACACATAAGGGATTGTGCCAAACTCATGGCAAGCTTTCATGTTGCTGCTCCAGAAAGCAAGCTTAGGGCAGTTTACAAGAAATTCAGCAGCATGGATCGCAGTGCTGTTGCTCTTCGTACCCCAGCAAAGAACTTGCTAACACAATCTTGA 1311 0.4355 MASSIALAIDQQQQQQQHSGENEKKVIVAAAEGRNNRRALQDIGNLVAKQAEKNVSKRNTKNIYANDQAATEKNKKSSSKLVNGAAVVGVRNFIATTKLEAAKKPTTENEVIVISSDDESEDEREKKPQAANGRKIREGVTRENAKAFSSVLSARSKAASGLAVPKKLVVNIDATDIDNELAAVEYIDDIYKFYKLTEDDGRVYDYMGSQPDXXXXDWLIEVHRKFELMPETLYLTLNIVDRFLSMRAVPRRELQLVGISSMLIASKYEEIWAPEVNDFVLISDNAYIREQVLVMEKTILRKLEWYLTVPTPYVFLVRYIKASTPSDDEMENMVFFLAELSLLHYPTIISYCPSVIAASAVYTARCTLERVPSWTETLEHYTGYSEEHIRDCAKLMASFHVAAPESKLRAVYKKFSSMDRSAVALRTPAKNLLTQS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212177g00002 436 MobiDBLite consensus disorder prediction 1 22 - -
Stsc212177g00002 436 SUPERFAMILY Cyclin-like 311 431 IPR036915 -
Stsc212177g00002 436 SMART cyclin_7 217 301 IPR013763 -
Stsc212177g00002 436 SMART cyclin_7 314 398 IPR013763 -
Stsc212177g00002 436 FunFam G2/mitotic-specific cyclin-1 298 424 - -
Stsc212177g00002 436 SUPERFAMILY Cyclin-like 178 307 IPR036915 -
Stsc212177g00002 436 Gene3D - 189 424 - -
Stsc212177g00002 436 MobiDBLite consensus disorder prediction 1 24 - -
Stsc212177g00002 436 MobiDBLite consensus disorder prediction 114 138 - -
Stsc212177g00002 436 PANTHER CYCLINS 119 416 IPR039361 -
Stsc212177g00002 436 Pfam Cyclin, C-terminal domain 310 425 IPR004367 -
Stsc212177g00002 436 MobiDBLite consensus disorder prediction 119 138 - -
Stsc212177g00002 436 Pfam Cyclin, N-terminal domain 189 307 IPR006671 -
Stsc212177g00002 436 Gene3D - 203 308 - -
Stsc212177g00002 436 SMART Cyclin_C_2 310 429 IPR004367 -
Stsc212177g00002 436 PIRSF Cyclin_A_B_D_E 1 436 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212177g00002 Stsc-Chr212177 8234 11127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212177g00002 1 425 Core Cell Cycle Gene Families AT2G26760 49.199 2.08e-131 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212177g00002 K21777 - gmx:547782 553.903