Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212169g00005 ATGGCTGCTGCACCAGCAATAATACCAAGTCACATGAAAGCTTGGGCCTATTCTGAGCATGGGAAATCAAACGCTGCTCTGAAATTCCATCCTAATTTTCCTATTCCTGAACTGAATGAAGATCAGGTACTAATCAAGGTTGTTGCTGCAGCCATAAATCCCATTGATTATCATAAGATTGTTGGTAATTACAAGGGTTCGGACGCCCCTTTTCCGATTGTTCCTGGCTATGATGTTGCGGGTGTGGTGATCAAAGTAGGAAGTGCAGCAAAGAAGTTTAAAGAAGGAGATGAAGTGTATGGTATGGTTGAGGCTAAAGATGTTGGCTCTTTGGCTGAATATACAACAGCACAAGAGAATGGTTTGGATCACAAGCCTCCTAATTTGAGCTTTGCTGAAGCTGCTAGCCTTCCTCTGGCAATTGAAACTGCTTATGGTGCCCTTCACAAAGTTGGACTTTCTGCTGGTCAATCTATCCTTGTTCTTGGAGGCACCGGGGGTGTCGGGAACCCTTGCTGTTCAGATTGCCAAACATGTTTTTGGTGCTTCAAAGGTAGCAGCTACAGTCAGTACTGGAAAACTGGAATTGATGAGGAAGCTGGGGGTTGA 609 0.4466 MAAAPAIIPSHMKAWAYSEHGKSNAALKFHPNFPIPELNEDQVLIKVVAAAINPIDYHKIVGNYKGSDAPFPIVPGYDVAGVVIKVGSAAKKFKEGDEVYGMVEAKDVGSLAEYTTAQENGLDHKPPNLSFAEAASLPLAIETAYGALHKVGLSAGQSILVLGGTGGVGNPCCSDCQTCFWCFKGSSYSQYWKTGIDEEAGG 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212169g00005 202 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 6 170 IPR044626 GO:0016628
Stsc212169g00005 202 Pfam Alcohol dehydrogenase GroES-like domain 41 102 IPR013154 -
Stsc212169g00005 202 SUPERFAMILY GroES-like 9 161 IPR011032 -
Stsc212169g00005 202 SMART PKS_ER_names_mod 22 198 IPR020843 GO:0016491
Stsc212169g00005 202 Gene3D - 2 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212169g00005 Stsc-Chr212169 19165 20837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212169g00005 13 99 Monolignol Biosynthesis Gene Families AT2G21730 33.333 2.66e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212169g00005 K18980 - adu:107494963 261.922