Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212159g00003 ATGGAATTACATACTATCTTGTTTTACTCACTTCTCTACGTACTAATATTCTTCCTATTCAACCTTCTCCTTCAGTCAAGAAGGTTCAAGAACCTGCCACCTGGACCACCCTCCCTCCCCATTATAGGCAACCTCCACCACCTCAAGAGACCCCTCCACCACACCTTCAAAGCCCTCTCCCAAAAATACGGCCACGTCATCTCCCTCTGGTTCGGCTCCCGCCTCGTTGTCGTCGTCCATTCCCACTCTCTCTTCCAAGAATGCTTCACCAAAAACGACATCGTTTTGGCCAACCGCCCCCGCTTCCTCTCCGGAAAGTACATCTTCTACAACTACACTACCCTAGGCTCTTCCGCCTATGGCGATCACTGGCGTAACCTCCGTCGTATCGTTGCTCTCGATGTCCTCTCTACGCACCGCATCAACTCCTTCTCTCCGATCCGGACAGACGAAACCACAAGGCTGATCCAGAAGCTGGCGGAGGAATCCTCCACGGGATTCGCCGAAGTAGAACTGACTTCAAGGTTCTATGACATGACGTTTAACAACATCATGAGGATGATCTCCGGGAAGAGATACTACGGGGATGACTGCGACATGGCGGATCTGGAGGAGGCGAAGCAGTTCAGAGCGATGGTTTCGGAGTTGCTGCAGCTTTCTGGCGCGAACAATAAGAACGACTTCATGCCGATCTTGAGGGTGTTGGATTACGAGAATTTGGAGAAGAGGCTGAAGAAGATTAGTAGTAAGACCGACACGTTCTTGAAGGGGCTGCTTGAGGAGCATCGCTTGAAGAAGAAGAAGGGTGCGAATTCTATGACCATGGTGGACCATCTTTTGAGCATGCAAGAATCGCAGCCTGAGTATTACACTGATCAGATTATCAAGGGCCTCGGATTGGGTATGCTACTTGCTGGAACGGACTCTTCAGCGGTAACACTAGAATGGGCAATGTCATGTTTACTTAACAACCCAGAGATAATGAAACAAGTGAGGGATCAATTGGAAGTCCACGTAGGACAAGACCGTTTGCTAGAAGAATCTGACCTTCCAAAACTACCCTGCCTTAAAAATATCCTCTTTGAGACCCTTCGTTTGTACACTCCTGCTCCTTTGTTGTTACCTCACTCAACTTCAGAGGAATGCACTATTGGAGGCTACAAAGTTCCAAGGGACACCATTGTTTTGGTCAACGCATGGTCCATTCATAGAGACCCTAACATGTGGAGTGATGCCACGAGTTTCAAGCCCGAAAGGTTTGAGAAAGAAGGAGAGCTTGACAAGTTCATTGCATTTGGGATGGGAAGAAGGGCTTGTCCCGGAGAAAACTTGGCTATACGTGCAATTTGTTTGACCTTGGGGCTATTGATTCAGTGCTTTGATTGGAAAAGAATTGATGATAAAGAGATTGATATGAGGGAGGAAAATGGATTCACCTTGTCAAGGTTGACCCCATTAAAGGCCATGTGCAAAGCACGTCCAATTATCACCAAGCTCGTCGAGTAA 1506 0.4794 MELHTILFYSLLYVLIFFLFNLLLQSRRFKNLPPGPPSLPIIGNLHHLKRPLHHTFKALSQKYGHVISLWFGSRLVVVVHSHSLFQECFTKNDIVLANRPRFLSGKYIFYNYTTLGSSAYGDHWRNLRRIVALDVLSTHRINSFSPIRTDETTRLIQKLAEESSTGFAEVELTSRFYDMTFNNIMRMISGKRYYGDDCDMADLEEAKQFRAMVSELLQLSGANNKNDFMPILRVLDYENLEKRLKKISSKTDTFLKGLLEEHRLKKKKGANSMTMVDHLLSMQESQPEYYTDQIIKGLGLGMLLAGTDSSAVTLEWAMSCLLNNPEIMKQVRDQLEVHVGQDRLLEESDLPKLPCLKNILFETLRLYTPAPLLLPHSTSEECTIGGYKVPRDTIVLVNAWSIHRDPNMWSDATSFKPERFEKEGELDKFIAFGMGRRACPGENLAIRAICLTLGLLIQCFDWKRIDDKEIDMREENGFTLSRLTPLKAMCKARPIITKLVE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212159g00003 501 Pfam Cytochrome P450 33 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 SUPERFAMILY Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 Coils Coil 500 501 - -
Stsc212159g00003 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Stsc212159g00003 501 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 FunFam Cytochrome P450 family protein 23 496 - -
Stsc212159g00003 501 PANTHER CYTOCHROME P450 82C3-RELATED 14 493 - -
Stsc212159g00003 501 Gene3D Cytochrome P450 21 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212159g00003 501 CDD CYP81 64 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212159g00003 Stsc-Chr212159 25070 27127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212159g00003 1 499 Cytochrome P450 AT4G37370 51.889 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212159g00003 K13260 - gmx:100784650 818.92