Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212151g00001 ATGGAAGACATTCTGGAACGATATGAAAGACAAGCTCATGCTGAATTTTCTAGCATAAACGATGAACCACAGGGAAACTGGTCTTATGAATGCATCAAGCTCACCGCCAAAGTTGAAGTATTAGAGAAGAACATTAGGAATTTTGTGGGAAATGATCTTGACCCCTTGAGTTTGAGAGAGCTTCAGAGTTTGGAACAGCAGCTTGATGCATCTCTAAAGCGTATCCGAATAAGAAAGAACCAAGTCATGAATCAATCCATCTCGGAGCTGAACAAAAGGGCAAGGCAATTGCAGGAGCAAAACAGTTTGCTTGCAAAGAAGATGAAAGATAAAGAGAAGACAATGAGTGAAGGTCCACAAGACTGCCTTGAATCTCTGGGAAAAAGTACACCTAACATCAACTTAACTTCTCCAGATAACCTACCACCACAAAGACTAATTCCTTGTCTAAATCTCAGTGGGACTATACATGCAAGAGTAGCATCACTGGAAGAAACAGTTGAAGCTCATAACGTTGCTGGTGGCAGCACTGTGATCCCACCTTGGATGCTGCAACATTTGACTACCTAA 570 0.4175 MEDILERYERQAHAEFSSINDEPQGNWSYECIKLTAKVEVLEKNIRNFVGNDLDPLSLRELQSLEQQLDASLKRIRIRKNQVMNQSISELNKRARQLQEQNSLLAKKMKDKEKTMSEGPQDCLESLGKSTPNINLTSPDNLPPQRLIPCLNLSGTIHARVASLEETVEAHNVAGGSTVIPPWMLQHLTT 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212151g00001 189 Coils Coil 61 114 - -
Stsc212151g00001 189 ProSiteProfiles K-box domain profile. 24 114 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc212151g00001 189 Pfam K-box region 24 108 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212151g00001 Stsc-Chr212151 3859 8241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212151g00001 1 154 MADS-box Gene Family AT1G26310 41.104 1.59e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212151g00001 K09264 - gmx:100788956 196.438