Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212142g00002 ATGGAGTCTGACGCCACTGCCACCAAACTTCCTCCTCCTCATGCGGAGGAAGCCACGGTTGCTCCACCGGCTGACCAGTCTAGCCCTCTACGTAAGATCATCACCGTCGCCACCCTCGCAATCGGCATTCAATTCGTGTGGGCCCTACAGCTAACCATACTCACACCCTACGTCCAAATACTCGGAACCCCTCACATGTGGGTTTCCTTCATCTGGCTCTGCGGTCCTATCTCCGGCATCATTGTCCAGCCCCTCGTTGGTTTCTATAGCGACCGCTGCACCTCCCGTTTCGGCCGTCGCCGCCCTTTCATTATCGCCGGAACCTTATCCGTTGTCTTTGCCTCCTTTCTCGTTGGCTATGCTGCAGACATAGGCCATTCCCTTGGGAACTCCGACGAAGCAAAGCTCCGCCCTCGCACCATTGCTGTCTTCATCATTGGCTTCTGGATCATCGATTTCGCCAACAACCTCCTCCAGGGACCGTGTCGCTCATTCATCGCCGACCTCGCCGCCGGTCACCACAGCAAGACCAGAACCGGCTACGCCTTCTACACTCTCTTCACAGCCGCCGGCAACATCCTCGGCTCCGCGGCGGGATCCTCCGGTGGAATCCACCGCGCGCTACCGTTCACGAAAACGACATCGTGCGATGAGTACTGCGCGGATGTGAAGACGTGCTTCCTCTTTGCCGCTGCGATTCAGTTAGCGCTGGTAACCGTTTCTGCTACGTACGTTAAGGAGAAACCGTTAAGAATAACAGATTCAGTTGGAAATGGCGGGAAAGGAGGGATTGGGGAATTATTCGGTGCTTTGCGGGAACTCAAGAGACCAATGTGGATCGTATTGTTGGTGACGTCATTCAACTGGTTTGCGTGGTTTCCGTTTTTACTTTACAATACTGATTGGATGGGGGTTGAAGTTTACGGTGCGCAGGATAAGAAGGAGAGGGTGTACACTATGGGGGTCCACGCGGGTGCGTTGGGTTTGATGTTGAATTCCGCTGTGGCAGGTGCCGCGTCGCTGGGACTCGGTGCGTTGGCGCGTGGGTTTCGCGGCGAGAAGAGGCTCTGGGGAGTTGTTAACTTCTTGCTTGCTCTTTGTTTGGCCATGACGGTGGTTGTTTCTAAGATGGCTGAACATTCTCGACGGTATGCGGTGGGTAATGACGGGTTTCGGGAGCCACTTCCTCCTCGGGCGGGGGTGAAGGCAGCTGCGTTGACTCTTTACTCCGTGCTTGGACTCCCTTTTGCGATAACTTGTAGCATACCCTATACTCTAGCATCTATATTCTCCAGCGCGGCAGGGGCAGGCCAAGGGCTATCCCTTGCAATTCTGAATCTTGCAGTGGTCATACCACAGATGGTGATGTCTCTGGTTAGCGGACCGTGGGATAAACTTTTTGGTGGGAACTTGCCAGCGTTTGTGTTGGGTGCTGCTGCAGCTGCAATAAGTGGCATACTCTCATTACTATTCCTTCCTTCTCCCCCGCCGGATTTCACCAAACCTGCTAGTGTAACACACAACACAGTTTCACAATTATGA 1542 0.5415 MESDATATKLPPPHAEEATVAPPADQSSPLRKIITVATLAIGIQFVWALQLTILTPYVQILGTPHMWVSFIWLCGPISGIIVQPLVGFYSDRCTSRFGRRRPFIIAGTLSVVFASFLVGYAADIGHSLGNSDEAKLRPRTIAVFIIGFWIIDFANNLLQGPCRSFIADLAAGHHSKTRTGYAFYTLFTAAGNILGSAAGSSGGIHRALPFTKTTSCDEYCADVKTCFLFAAAIQLALVTVSATYVKEKPLRITDSVGNGGKGGIGELFGALRELKRPMWIVLLVTSFNWFAWFPFLLYNTDWMGVEVYGAQDKKERVYTMGVHAGALGLMLNSAVAGAASLGLGALARGFRGEKRLWGVVNFLLALCLAMTVVVSKMAEHSRRYAVGNDGFREPLPPRAGVKAAALTLYSVLGLPFAITCSIPYTLASIFSSAAGAGQGLSLAILNLAVVIPQMVMSLVSGPWDKLFGGNLPAFVLGAAAAAISGILSLLFLPSPPPDFTKPASVTHNTVSQL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212142g00002 513 NCBIfam sucrose/proton symporter 29 497 IPR005989 GO:0005886|GO:0008515|GO:0015770
Stsc212142g00002 513 Gene3D MFS general substrate transporter like domains 28 490 IPR036259 -
Stsc212142g00002 513 CDD MFS_SLC45_SUC 33 490 - -
Stsc212142g00002 513 MobiDBLite consensus disorder prediction 1 25 - -
Stsc212142g00002 513 PANTHER SUGAR TRANSPORTER 29 491 - -
Stsc212142g00002 513 Pfam MFS/sugar transport protein 40 291 - -
Stsc212142g00002 513 SUPERFAMILY MFS general substrate transporter 33 496 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212142g00002 Stsc-Chr212142 26169 28026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212142g00002 25 498 Sucrose Transporter Gene Family AT1G22710 58.678 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212142g00002 K15378 - gmx:547679 599.742