Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212142g00001 ATGGACACCCTTTCTTCCACCAAGCACAACCACAATCCTTCCAAGCCTAATTCTCTTCAAGTAGAAGATCCGGCTGCGTTAACGGAGCCGAGTCCTCTACGTAAGATCATTGTCGTGGCATCCATTGCCGCAGGTGTTCAGTTTGGATGGGCTTTACAGCTCTCCCTACTGACACCCTACGTCCAACTGCTGGGCATCCCACATACTTGGGCCGCTTTCATCTGGCTATGCGGCCCAATAAGTGGGATGCTCGTGCAGCCTATAGTAGGTTACTATAGTGACCGCAACACGTCGCGGTTTGGACGTCGCCGTCCTTTCATTGCTGCCGGCTCCTTTGCCGTCGCCGTCGCAGTGTTCCTTATCGGCTACGCCGCTGACATGGGACACATGTTCGGCGACTCTCTCCAGAAGAAGACCCGCCCGCGTGCCATAGCCATCTTCGTCGTCGGGTTCTGGATCCTTGACGTGGCGAACAACATGCTCCAGGGTCCATGCCGGGCACTCCTCGCCGACCTCGCAGCCGGAGACCAGCGGAAAACGCGGACAGCCAACGCCGGCTTTTCCTTCTTCATGGCTGTAGGAAACGTCCTCGGATACGCCGCCGGTTCCTACAGCGGCCTCCACCACATCTTTCCGTTCACGAAAACAAAAGCGTGCGATGTCTACTGCGCGAATCTCAAAAGCTGCTTCTTCCTCTCAATCGCGATGTTGCTAACCCTAGCCACGGCGGCGTCGATCTACGTAAAAGAGAAGCCACTGTCGCCGGAGAAATCAACGGCGGCGGACGCCGACGACGAAGGCAAATCACACGGCATACCGTGCTTCGGAGAATTGTCCGGCGCGTTCCGCGAATTGAAGAGGCCGATGTGGATCTTGTTGCTGGTGACGTGCCTGAATTGGATCGCGTGGTTCCCGTTCTTGCTCTTCGACACCGATTGGATGGGGAGAGAAGTGTACGGCGGAGAGGTTGGTGTTGGTAAGGCATACGATATGGGAGTTCGCGCCGGAGCCTTAGGGCTGATGTTGAACTCGGTGGTGCTTGGAGCGACGTCGGTGGGGGTGGAGTTCTTGGCGCGTGCAGTTGGTGGTGTTAAGAGGCTTTGGGGAATCGTGAACTTCATTCTTGCCATTTGTCTTGCAATGACGGTTTTGGTTACTAAGCAAGCTGAGCACTCGCGCCACTTCGCGCCTGGTTCAAACGACCCTCTTCCGCCGCCCGGAAACGTTAAGGCCGGAGCTTTGGCTCTCTTCTCCGTTCTCGGAATTCCTCTCGCGATCACTTACAGCATACCCTTTGCTCTAGCATCTATATTCTCTAGCTCCACAGGGGCAGGACAAGGGTTATCTCTAGGAGTTCTCAATCTTGCAATTGTCATACCACAGATGGTGATTTCTGTAACTAGTGGACCATGGGATGCTCTGTTTGGTGGTGGTAACTTGCCAGCATTTGTGGTGGGAGCAGTGGCAGCATTAGCTAGTGGCATATTATCCATATTCCTGCTACCATCTCCGCCGCCGGATTTGGCCAAGGCCGCAACCGCAGCCGGAGGAGGCTTCCATTAA 1563 0.5528 MDTLSSTKHNHNPSKPNSLQVEDPAALTEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYYSDRNTSRFGRRRPFIAAGSFAVAVAVFLIGYAADMGHMFGDSLQKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLAAGDQRKTRTANAGFSFFMAVGNVLGYAAGSYSGLHHIFPFTKTKACDVYCANLKSCFFLSIAMLLTLATAASIYVKEKPLSPEKSTAADADDEGKSHGIPCFGELSGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGEVGVGKAYDMGVRAGALGLMLNSVVLGATSVGVEFLARAVGGVKRLWGIVNFILAICLAMTVLVTKQAEHSRHFAPGSNDPLPPPGNVKAGALALFSVLGIPLAITYSIPFALASIFSSSTGAGQGLSLGVLNLAIVIPQMVISVTSGPWDALFGGGNLPAFVVGAVAALASGILSIFLLPSPPPDLAKAATAAGGGFH 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212142g00001 520 MobiDBLite consensus disorder prediction 1 21 - -
Stsc212142g00001 520 Pfam MFS/sugar transport protein 44 302 - -
Stsc212142g00001 520 SUPERFAMILY MFS general substrate transporter 34 505 IPR036259 -
Stsc212142g00001 520 FunFam Sucrose transport protein 30 501 - -
Stsc212142g00001 520 Gene3D MFS general substrate transporter like domains 29 500 IPR036259 -
Stsc212142g00001 520 CDD MFS_SLC45_SUC 36 499 - -
Stsc212142g00001 520 PANTHER SUGAR TRANSPORTER 33 500 - -
Stsc212142g00001 520 NCBIfam sucrose/proton symporter 32 506 IPR005989 GO:0005886|GO:0008515|GO:0015770
Stsc212142g00001 520 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212142g00001 Stsc-Chr212142 792 4459 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212142g00001 27 520 Sucrose Transporter Gene Family AT1G22710 70.400 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212142g00001 K15378 - gmx:547679 860.136