Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212140g00002 ATGGCACCATTAACACCAAAATCCAATAATAATGATCAAGACCCTGTGGAAAATCAAGCTCTTATTAAGCTTGAATCGGCATGTTCTGATTTACAATCTCTCCTCAAAGGAGCAGAGACCATGGAACACAACCTTGTAACCATGGAAACTCGGTTCGATTACTTACAAGGATCTTTGTCCAATGCTTCTAGAAGGATCACACCTTTGCAATCCTTGGCCATGTCAAGGAAAGCACTCGAAACAAGGATCAATCGAGCCGTCTCCCCGGCGCTGGAGCTTATCGAGACCTTTAAGGTCGCCGAGTCCCTCCAGCACCGGATTCTTGACCTCTCGGCCAAGCTTTCGGCCGAGAGGACTCAACAGAAGAGGCTGCAGAAGCTTCTAGAATACGTCGATTGCGTCGATCGATTAAACGAGGCAATTAACTCTATATGTCAAGTTGGTGAGGGTGTTATTTTAAAGCTTCAAGAGGTTGTGGAGTTCATAAGCAGAACAAAGGCTGCTGATCAATACAGGACACAAAGGTTGAGAGAGGCACTGGCCACACTGAAGGCACTGTATGAAACAGAGGTGGATGAGATGAGATTTGAAGGGTTACTAGACCAAGCTTTGCTTCATATGCAAGATGAATTTGAGGCAATATTATTGAACACAAAGCATAAGAATCTAGGAGGAGATATGTCACAACTAACATATGATGATGATGATGATGAGAATAATAATAATGACAATAACAATGAATTGCTTGTGAATAACAACTCTGGTGCTGGTTGTGAATTGGGTTCAGAGCTTGAAGTTGAAGTCCTGAGAAGAATTTCATTCACTCTTGCTGCTAATGATTGCTTGGATATTTGCATTGATATCTACGTCAAGGTGAGGTATAGAAGGGCAGCAAAAGCATTAATGAAGCTAAACCCAGATTACTTAAAAACATACACACCAGAAGGAATTGATGAAATGGAGTGGGAAACCTTAGAATCAGCCATAACCCTTTGGACCCAACACTTCCAAGTTGCTGTTAAAAAAGTTCTCCAATCAGAGAAATCACTCTGCCAAAGAGTCCTAGGCACAATCATGGAAGGGCTAGTTTGGCCAGAATGCTTTGTTAAGATCTCGGACAAGATCATGGCCGTGTTCTTTCGGTTCGGTGAGGGAGTGGCGAGGAGCAGCAAGGAGCCTCAGAAGTTGTTCAAGCTCTTGGACATGTTTGAATCATTGGAGAGGCTAAAAGAGAATGTGTTGGAGACTTTTGAAGGTGAATCTGGTGTGGATATTTGTACTAGGTTTAGGGAACTTGAGAAGCTCATTATTGATGCATCAGGCAAAGTTTTTTGGGAATTTGGATTGCAAATTGAAGGCAATGCTGATGGACTCCCTACACCACAAGATGGTTCTGTTCCAAAACTTGTTAGGTACGCAATTAACTACCTAAAGTACCTTGCCTCGGATAATTACAGAGCAGCCATGGCTAAGGTTCTAAGAACAGAGCAAATATGGAAAAATGGGATACTGTCCAAACAAGAAACAGATGAGAGTTTACTGAAGAATGCAATTTCCAATGTCATGGAAGCACTTCAAAGAAACATTGAATCCAAACGTTCAAGATGCAGGGACAAGATTTTAGTCCAAGTTTTCTTGATGAACACGTATTGGTACATATACATGAGGACCAAGAACACAGAACTTGGTGAGCTCTTGGGAGATCAATACTTGAAGATTGGTTACAAAACAGTCGCCGAAGAATCTGCTTACTTGTACCAGAAGCAATCGTGGGGTGTTTTGGTGGCGATTTTGGACGGCGGCGATGTCCAAGAACATGGGAAGGATACCATAGGAAGGTTGGTGAATGAGAAGATTGAGAGTTTCTTGAAGTGTTTGAATGAGGTTTGTGAGAGGCATATAAGAGGTGGTTATAGCATACCGGATTTAGATTTGCGAGAACAGATGAGAGAATCGACTATGAAGCTTGTTGTACCGGCTTATATTGAGTTCTTGGAGTCTTACTCTGGATTCTTGCAAAGGAAAATGTATCCGAGCCCCGATAAGTTGCGAGGGATGATCAAGAAGGCTTTTGATGGCGGCGAGGGGAGGCTATGGAGGCGTGGTTCCACTTCTAATGACCGGAATGCTGGACGGAACTCTGGCTCTATAGAGGGTGATATAAGGGATTTGAGACGATCAAGATCAGGGACTCAAGATTTTTTATAA 2208 0.4271 MAPLTPKSNNNDQDPVENQALIKLESACSDLQSLLKGAETMEHNLVTMETRFDYLQGSLSNASRRITPLQSLAMSRKALETRINRAVSPALELIETFKVAESLQHRILDLSAKLSAERTQQKRLQKLLEYVDCVDRLNEAINSICQVGEGVILKLQEVVEFISRTKAADQYRTQRLREALATLKALYETEVDEMRFEGLLDQALLHMQDEFEAILLNTKHKNLGGDMSQLTYDDDDDENNNNDNNNELLVNNNSGAGCELGSELEVEVLRRISFTLAANDCLDICIDIYVKVRYRRAAKALMKLNPDYLKTYTPEGIDEMEWETLESAITLWTQHFQVAVKKVLQSEKSLCQRVLGTIMEGLVWPECFVKISDKIMAVFFRFGEGVARSSKEPQKLFKLLDMFESLERLKENVLETFEGESGVDICTRFRELEKLIIDASGKVFWEFGLQIEGNADGLPTPQDGSVPKLVRYAINYLKYLASDNYRAAMAKVLRTEQIWKNGILSKQETDESLLKNAISNVMEALQRNIESKRSRCRDKILVQVFLMNTYWYIYMRTKNTELGELLGDQYLKIGYKTVAEESAYLYQKQSWGVLVAILDGGDVQEHGKDTIGRLVNEKIESFLKCLNEVCERHIRGGYSIPDLDLREQMRESTMKLVVPAYIEFLESYSGFLQRKMYPSPDKLRGMIKKAFDGGEGRLWRRGSTSNDRNAGRNSGSIEGDIRDLRRSRSGTQDFL 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212140g00002 735 MobiDBLite consensus disorder prediction 718 735 - -
Stsc212140g00002 735 Pfam Exo70 exocyst complex subunit 332 687 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc212140g00002 735 Coils Coil 515 535 - -
Stsc212140g00002 735 Gene3D Exocyst complex component Exo70 165 698 - -
Stsc212140g00002 735 SUPERFAMILY Cullin repeat-like 174 692 IPR016159 -
Stsc212140g00002 735 MobiDBLite consensus disorder prediction 227 248 - -
Stsc212140g00002 735 PANTHER EXOCYST COMPLEX PROTEIN EXO70 83 684 IPR004140 GO:0000145|GO:0006887
Stsc212140g00002 735 MobiDBLite consensus disorder prediction 698 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212140g00002 Stsc-Chr212140 2877 6700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212140g00002 51 674 EXO70 exocyst subunit family AT4G31540 27.994 1.11e-70 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212140g00002 - - ahf:112697742 1004.2