Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212125g00004 GATCTACTTGTAGCGGGTACAGAAACAATAGCATATGTATTAGAAAGAGCAATGACTGAAGTACTCCACAATCCAAAGGTTATGTTGAAAGCCAAAGAAGAATTAGAAGAAAACATTGGAAGAGGTAACCCTATTGATGAGTCAGATATTTTAAAACTCCCCTACTTACAAGCAATAGTAAAAGAGAGTTTACGATTATACCCTCCAGCTCCAGTCTTGTTCCCAAGAAAAGCTAAGGAAGATGTTGAAATCTCATCAGGTTATAGGATCCCAAAGGGTGCAAGAGTCCTAATAAATGAATGGGCTATTTGTAGGAACCCTAATGTGTGGGACAATGCCAATTTGTTCTTGCCAGAGAGGTTCTTGGGGTCAACAATTGATGTTAAAGGAAGACATTTTCAGCTGACACCATTTGGAAGTGGAAGAAGAATTTGTCCTGGGTTAACATTAGCTATGAGAATGATTCATGTGATGTTGGGATCATTGATCAACTCTTTTGATTGGAAACTTGGAAATATGAACAAGGATCAGCCTCTCAAAGCTATTCCTGTTCCTGTTATAATAATTAAACAATAA 576 0.375 DLLVAGTETIAYVLERAMTEVLHNPKVMLKAKEELEENIGRGNPIDESDILKLPYLQAIVKESLRLYPPAPVLFPRKAKEDVEISSGYRIPKGARVLINEWAICRNPNVWDNANLFLPERFLGSTIDVKGRHFQLTPFGSGRRICPGLTLAMRMIHVMLGSLINSFDWKLGNMNKDQPLKAIPVPVIIIKQ 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212125g00004 191 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212125g00004 191 PRINTS P450 superfamily signature 136 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212125g00004 191 PRINTS P450 superfamily signature 145 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212125g00004 191 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212125g00004 191 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 176 - -
Stsc212125g00004 191 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212125g00004 191 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212125g00004 191 PRINTS E-class P450 group I signature 135 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212125g00004 191 PRINTS E-class P450 group I signature 99 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212125g00004 191 PRINTS E-class P450 group I signature 145 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212125g00004 191 FunFam Predicted protein 3 190 - -
Stsc212125g00004 191 Gene3D Cytochrome P450 1 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212125g00004 191 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 138 147 IPR017972 GO:0005506|GO:0016705
Stsc212125g00004 191 SUPERFAMILY Cytochrome P450 1 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212125g00004 191 Pfam Cytochrome P450 1 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212125g00004 Stsc-Chr212125 19806 20381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212125g00004 1 172 Cytochrome P450 AT1G33730 55.233 1.19e-66 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212125g00004 - - ahf:112701636 318.931