Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212115g00001 ATGGCTGATCTTGCTAGAAGCTTTTTAGTGCTAGGGCTTCTTATTGCGACGGTTCCATCTCTTGGCCATGCTTTATTATCGAGGAAACCGAAAACATCTGTGGAAATTCAGAATGTTCTAGAAGGCCGCGACGACCTAACGATTCATTGCAAATCAAAAGATGATGATCTTGGGGTGCAATATCTAAAGCCTCGCGAAAATTTTTCGTTCCGTTTTAGACCTAATATCTTTGGAACCACACTTTTCTTCTGTAGCTTTGCATGGAAGGGTGGTGTGTGTCGTTGGTTCGATATATATGAACATGATAGGGACGAACATTGCACGAAATGCACGTGGCAAATATTCAAAGAAGGGCCTTGTAGGTTTACTGTGGATGATTATGATTATGGTGGTGAACATGGAGTTGTTGATGAGCTTTGCTATGATTGGAATCCAGATAGATGTTGA 447 0.4139 MADLARSFLVLGLLIATVPSLGHALLSRKPKTSVEIQNVLEGRDDLTIHCKSKDDDLGVQYLKPRENFSFRFRPNIFGTTLFFCSFAWKGGVCRWFDIYEHDRDEHCTKCTWQIFKEGPCRFTVDDYDYGGEHGVVDELCYDWNPDRC 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212115g00001 148 PANTHER - 30 122 IPR010264 -
Stsc212115g00001 148 Pfam Plant self-incompatibility protein S1 34 143 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212115g00001 Stsc-Chr212115 11219 11665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212115g00001 29 144 Carbohydrate Esterase AT3G16970 40.496 5.60e-25 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212115g00001 - - adu:107485682 172.94