Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212113g00005 ATGGCAACAATGAAGGTTCATGGAAACCCTTTCTCAATGGCAACCATGAGAGTCACTGCTGTCTTGTATGAAAAGGATCTTCATTTTCAGTTTATTAATATCGACATGATGAACTCTCAACATAAAAAGGAACCCTTCATTTCCCTTAATCCATTTGGTCAAGTTCCTGCATTTGAAGATGGAGACTTAAAGCTCTTTGAATCAAGGGCAATAACAAGATACATAGCAGATGCATATGATGAAAACGGTACTCAACTAATAATAAAGAATGATCCAAAGAAGATGGCTATAATTGGATTGTGGCTTGAAGTTGAAGCCCAACAATATGAACAACCAGCTGCAAAACTTGCAAGAGAGCTTCATTTCAAGCCACTCTTCTTTGGCATCCCATCAGATCCAAAAGTTGTTGAAGAGAATGAAGCTAAGCTTAGTGTTGTTCTTGGAATCTATGAGAAGAGGCTCTCTGAGTCAAAGTATTTGGCCGGAGATTCTTTCACTTTGGCTGATCTTCATCACCTTCCAACCCTTCATTTCTTGATGATGACGCCGGCCAAGAAGCTGTTCGAGTCGCTGCCACGTGTCAGTGCTTGGGTGGCTGATATCTCAGCTAGGCCTGCTTGGTTGAAAGTCATTTCCATGCTCAATTAA 648 0.409 MATMKVHGNPFSMATMRVTAVLYEKDLHFQFINIDMMNSQHKKEPFISLNPFGQVPAFEDGDLKLFESRAITRYIADAYDENGTQLIIKNDPKKMAIIGLWLEVEAQQYEQPAAKLARELHFKPLFFGIPSDPKVVEENEAKLSVVLGIYEKRLSESKYLAGDSFTLADLHHLPTLHFLMMTPAKKLFESLPRVSAWVADISARPAWLKVISMLN 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212113g00005 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 215 IPR010987 -
Stsc212113g00005 215 Gene3D Glutaredoxin 1 87 - -
Stsc212113g00005 215 CDD GST_C_Phi 93 211 IPR034347 -
Stsc212113g00005 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 212 - -
Stsc212113g00005 215 FunFam Glutathione S-transferase F2 3 87 - -
Stsc212113g00005 215 FunFam Glutathione S-transferase F2 89 211 - -
Stsc212113g00005 215 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Stsc212113g00005 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Stsc212113g00005 215 SFLD Glutathione Transferase (cytosolic) 1 213 IPR040079 -
Stsc212113g00005 215 SFLD Main.5: Phi-like 1 213 - -
Stsc212113g00005 215 SUPERFAMILY GST C-terminal domain-like 89 211 IPR036282 -
Stsc212113g00005 215 Gene3D - 91 215 - -
Stsc212113g00005 215 Pfam Glutathione S-transferase, C-terminal domain 124 205 IPR004046 -
Stsc212113g00005 215 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212113g00005 Stsc-Chr212113 25550 26836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212113g00005 6 213 Glutathione S-transferase Gene Family AT2G47730 57.212 3.92e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212113g00005 K00799 - gmx:100799868 293.508