Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212113g00004 ATGAAACTCCATGGAAACCCTATGTCAACAGCCACCATGCGAGTTGCTGCTGCCTTGTATGAGAAAGAGCTTGATTTCGAGTTTCTTACTATTGACTTCAACAGTGGTGAACATAAAAAGGAACCTTACCTTTCTCTTAATCCATTTGGTCAACTTCCAGCATTTGAAGATGGAGACTTGAAGCTCTTTGAATCAAGGGCAATAACAAAATACATTGCACATGAATATGCTAATAAGGGGACTCAACTAATAGAAACCAATGATTCAAAGAAGATGGCTATCATCACTCTATGGCTTGAAGTTGAAGCTCAACAATATGAACAACCAGCTTCAAAGCTTCTATGGGAGCTTCATTTTAAGCAACTCTTTGGAATCCCAACAGACCCAAAAGTTGTTGAAGAGAATGAAGCTAAGCTTAGTGTTGTTCTTGGAATCTATGAGAAGAGGCTCTCTGAGTCAAAGTACTTGGGTGGTGATTCTTTCACTCTGGCTGATCTTCATCACCTTCCGACCCTTCATTTCTTGATGTCGACCCAGGTGAAGAAGCTCGTCGAGCCGCTGCCACGTGTCAGTGCTTGGGTGGCTGATATCACAGCTAGACCATCTTGGTCTAAGGTCACTTCCATGCTCAATTAA 636 0.4214 MKLHGNPMSTATMRVAAALYEKELDFEFLTIDFNSGEHKKEPYLSLNPFGQLPAFEDGDLKLFESRAITKYIAHEYANKGTQLIETNDSKKMAIITLWLEVEAQQYEQPASKLLWELHFKQLFGIPTDPKVVEENEAKLSVVLGIYEKRLSESKYLGGDSFTLADLHHLPTLHFLMSTQVKKLVEPLPRVSAWVADITARPSWSKVTSMLN 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212113g00004 211 FunFam Glutathione S-transferase F2 1 84 - -
Stsc212113g00004 211 Pfam Glutathione S-transferase, C-terminal domain 111 201 IPR004046 -
Stsc212113g00004 211 CDD GST_C_Phi 90 206 IPR034347 -
Stsc212113g00004 211 SUPERFAMILY Thioredoxin-like 1 80 IPR036249 -
Stsc212113g00004 211 CDD GST_N_Phi 1 74 - -
Stsc212113g00004 211 SFLD Glutathione Transferase (cytosolic) 1 209 IPR040079 -
Stsc212113g00004 211 SFLD Main.5: Phi-like 1 209 - -
Stsc212113g00004 211 Gene3D - 87 211 - -
Stsc212113g00004 211 FunFam Glutathione S-transferase F2 86 207 - -
Stsc212113g00004 211 Pfam Glutathione S-transferase, N-terminal domain 1 73 IPR004045 -
Stsc212113g00004 211 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 211 IPR010987 -
Stsc212113g00004 211 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 208 - -
Stsc212113g00004 211 SUPERFAMILY GST C-terminal domain-like 88 206 IPR036282 -
Stsc212113g00004 211 Gene3D Glutaredoxin 1 84 - -
Stsc212113g00004 211 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212113g00004 Stsc-Chr212113 22472 24867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212113g00004 3 209 Glutathione S-transferase Gene Family AT2G47730 56.039 5.09e-85 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212113g00004 K00799 - gmx:100799868 309.686