Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212113g00003 ATGAAGCCATTTGGTCTAGTTCCAGCACTTGAAGATGGAGACTTGAAGCTCTTTGAATCAAGGGCAATAACAAAATACATTGCACATGAATATGCTGATAAGGGGACTCAACTAATAGTAACCAATGATTCAAAGAAGATGGCTATAATCAATGTATGGCTTGAAGTTGAATCTCAACAATATGAACAAACAGCTTCCAAGCTTCTATGGGAGCTTCATTACAAGTCACTATTTGGAATCCCAACAGACCCAAAAGCTGTTGAGGAGTATGAAGCAAAGTTTAGTGTCGTTCTTGGAATCTATGAGAAGAGGCTCTCTGAGTCAAAGTATTTGGCTGGTGATTCTTTCACTTTGGCTGATCTTCATCACCTTCCATCCCTTCATTTCTTGATGCCAACGCGGGTCAAGAAGCTGGTCGAGTCGCTGCCACGTGTCAGTGCCTGGGTGGCTGATATCACAGCTAGACCATCTTGGTCTAAGGTCACTTCCATGCTCAATTAA 501 0.4232 MKPFGLVPALEDGDLKLFESRAITKYIAHEYADKGTQLIVTNDSKKMAIINVWLEVESQQYEQTASKLLWELHYKSLFGIPTDPKAVEEYEAKFSVVLGIYEKRLSESKYLAGDSFTLADLHHLPSLHFLMPTRVKKLVESLPRVSAWVADITARPSWSKVTSMLN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212113g00003 166 CDD GST_C_Phi 45 161 IPR034347 -
Stsc212113g00003 166 SUPERFAMILY GST C-terminal domain-like 43 161 IPR036282 -
Stsc212113g00003 166 Pfam Glutathione S-transferase, N-terminal domain 2 28 IPR004045 -
Stsc212113g00003 166 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 43 166 IPR010987 -
Stsc212113g00003 166 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 35 IPR004045 -
Stsc212113g00003 166 SFLD Glutathione Transferase (cytosolic) 2 155 IPR040079 -
Stsc212113g00003 166 FunFam Glutathione S-transferase F2 41 162 - -
Stsc212113g00003 166 Pfam Glutathione S-transferase, C-terminal domain 74 156 IPR004046 -
Stsc212113g00003 166 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 163 - -
Stsc212113g00003 166 Gene3D Glutaredoxin 1 39 - -
Stsc212113g00003 166 Gene3D - 42 166 - -
Stsc212113g00003 166 SUPERFAMILY Thioredoxin-like 2 31 IPR036249 -
Stsc212113g00003 166 SFLD Main (cytGST) 2 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212113g00003 Stsc-Chr212113 18730 19687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212113g00003 1 164 Glutathione S-transferase Gene Family AT2G47730 56.098 5.69e-66 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212113g00003 K00799 - gmx:100799868 232.261