Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212113g00002 ATGTCTGAAGAAGTGGTGGGTTTAGGGTCTGATCATCATCATGGTGATGATGGCATCATTGCTGGAAAGAAGAAGTTATCAAGAAGATATGATTCTCTAGATATGGAGTCTCGCATCTTCCCAAATTCTTCTACCCACTCTAAAGGGCCATCGATGTCAACGATTATGCATCTAGCGTTTCAAAGCATAGGAGTTGTGTATGGAGACATAGGGACATCACCATTGTATGTTTATTCAAGCACTTTCACTGATGGCATAAAGCACAATGATGATATTTTGGGTGTTCTTTCTATCATCCTTTACACTATTACCCTCATTCCTCTTATCAAATATGTCCTCGTCGTCTTAAGGGCAAACGACAATGGAGATGGAGGGACATTCGCTTTGTACTCTCTGATATGCCGCTATGCGAAAGTTAGTCTTACTCCAAATCAACAAATTGAAGATGCACAAGTTTCTAATTATCAGTTAGATTTGCCAAATAGCAGCACAAAGAGGGCTTCAATTGTTAAGTCAAAGCTTGAGAACAGTTACTTTGCAAAGCTCTTCTTGTTGCTCGTAACCATGCTTGGCACCTCCATGGTCATTGGAGATGGTGTACTCACTCCTTGCATTTCTGTTTTATCTGCTGTGGGAGGGCTCAAGGAAGCTACTTCAAAAATAAATGACGAACGCGTTGTTGGGATATCGATAGGAATCTTGATATGCCTATTCATGGTTCAAAGGTTTGGAACAGATAAAGTTGGGTACAGTTTTGCACCAATTATATGTGTTTGGTTTTTGTTTATTGGAGGGATTGGTGTATACAATTTCATCAAGTATGATCCCATTGTTATCAAAGCTATAAATCCAGCATACATTGTTTACTATTTTCGGAGGAACAAGAAAGATGCTTGGATTTCTCTTGGTGGCACCGTCCTTGCCATAACAGGAACCGAAGCACTATTTGCGGATGTTGGACATTTCACAGTGAGATCAATACAAATAAGCATGTGCTCTGTGACATACCCTGCCCTAATTCTGGCTTATACTGGACAAGCTTCATTCCTTCGCAAACACAATGATTTTGTTTCCGATACTTTCTATAAGTCCATACCACATAAATTGTATTGGCCAATGTTTGTGGTTGCTGTGGCAGCAGCAATAATAGCATCACAAGCGATGATATCAGGAACATTCTCAATCATACAACAATCCTTAGCACTTGGATGCTTCCCTCGTGTCAAAGTTGTACACACATCAGCCAAGTATGAAGGACAAGTTTACATTCCTGAAATCAATTTCATTCTCATGATTGCTTGTGTTGCTGTCACTGCTGGATTCAAAAACACCATCAAAATTGGCAACGCTTATGGAATAGCAGTGGTGTTTGTAATGACACTTACATCAGCTTTCCTTGTTCTAGTCATGATCATGATATGGAAGACTAATTTACTATTAATTATAAGCTATGTTCTTATCATTGGTTCTGTGGAGCTTCTATACTTAAGCTCAGTGCTATACAAATTCAATGAAGGAGGGTACCTTCCACTAGCATTTGCAATGGTTCTAATGGCCATAATGTTCATTTGGAATGATGTGTATAGAAAAAAGTACTACTATGAATTGGATCATAAGATTTCTCCCGAAAGGCTTAAGGAAATTATATCTAACAACAAAAGGTTATATAGAATTCCTGGATTCGCCATATTCTACTCCGAGCTTGTTCAAGGGATTCCACCGATTTTCAAGCACTATGTGTCGAATGTTCCAGCGTTGCATTCGATTGTCGTGTTTATCTCGATCAAATCGTTGCCTGTTAGCAAGGTTTCAGTTGAGGAGAGGTTCATTTTTCGCCGAGTTGAACACGAAGAACTTAAGGTATTCAGATGTGTTGTGAGATACGGATACACTGATGTACTAAACGAGAAAGAGCCGTTAGAGGAGTTGTTAGTTAGAAGGTTGAAGTCATTTGTTGATTCATCATCACAAAAAGTGGTGATCCATGAAGAAGAAAAAATTGAAGAGGAGAAAGTGAGTGATAATGGTGGTGATGATGAGACTATTGAGGCAATTGAGAAAGCATTGGAAGCTGGAATTGTTCATTTGATTGGTGAGAGTGAAGTTGTTGCTAGCAAAGGAAGTGGCATAGGGAAGAAGTTTTTGATAAATTATGCCTACAATTTCTTGAAAAAGAATTTGAGGCAAAGTGACAAAGTGTTTGATATTCCTCATGAGCGTATGGTTAAGGTGGGAATGACTTATGAACTTTAA 2253 0.3884 MSEEVVGLGSDHHHGDDGIIAGKKKLSRRYDSLDMESRIFPNSSTHSKGPSMSTIMHLAFQSIGVVYGDIGTSPLYVYSSTFTDGIKHNDDILGVLSIILYTITLIPLIKYVLVVLRANDNGDGGTFALYSLICRYAKVSLTPNQQIEDAQVSNYQLDLPNSSTKRASIVKSKLENSYFAKLFLLLVTMLGTSMVIGDGVLTPCISVLSAVGGLKEATSKINDERVVGISIGILICLFMVQRFGTDKVGYSFAPIICVWFLFIGGIGVYNFIKYDPIVIKAINPAYIVYYFRRNKKDAWISLGGTVLAITGTEALFADVGHFTVRSIQISMCSVTYPALILAYTGQASFLRKHNDFVSDTFYKSIPHKLYWPMFVVAVAAAIIASQAMISGTFSIIQQSLALGCFPRVKVVHTSAKYEGQVYIPEINFILMIACVAVTAGFKNTIKIGNAYGIAVVFVMTLTSAFLVLVMIMIWKTNLLLIISYVLIIGSVELLYLSSVLYKFNEGGYLPLAFAMVLMAIMFIWNDVYRKKYYYELDHKISPERLKEIISNNKRLYRIPGFAIFYSELVQGIPPIFKHYVSNVPALHSIVVFISIKSLPVSKVSVEERFIFRRVEHEELKVFRCVVRYGYTDVLNEKEPLEELLVRRLKSFVDSSSQKVVIHEEEKIEEEKVSDNGGDDETIEAIEKALEAGIVHLIGESEVVASKGSGIGKKFLINYAYNFLKKNLRQSDKVFDIPHERMVKVGMTYEL 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212113g00002 750 Pfam K+ potassium transporter 59 632 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc212113g00002 750 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 50 749 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc212113g00002 750 NCBIfam potassium uptake protein 58 749 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212113g00002 Stsc-Chr212113 6518 11489 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212113g00002 9 750 Inorganic Solute Cotransporters AT4G13420 53.807 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212113g00002 K03549 - qsa:O6P43_010741 1082.4