Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212107g00006 ATGTGTCTGCCATCTACAACCTGGTTCCAGGCATCACTTTGGGGAAGCAGCAGGGAAGGCCAAGGTGTTTGGAACTTTGATTGGAATTGGTGGGGCTATGGTCTTGACCTTTTGAAGAACAACCCATCATCACAACATCACCATAGTAATGACTTGTTGGGGGTTGTGTGCGCCATAGCTAGCTGCTTCTCTTATGCTTCGTGGCTCATCATTCAGGCTAAGATGACCAAGGAATACCCAAGTCACAACTCAAGCACAGCTTTGATGCTTACAGCAGCAGCTGCAATTCAAGCCACTGTTTTTGCTTTTTGTAGTGAGAGGGACCTCTCTCAATGGAAGCTTGGAGCAGTGATGATAGTGTGTGGACTATTCGCGGTTCTATGGGGGAAGAACAAAGAGATGAAAAAGGTAGCACAGTTGGTGCCATCTGAAATCATCCAGCAGCAGCAGCAAGAGGATCAAGCTATACAAGTTGTTGTTACATCCACGCCAGTTGTCATAAACCATGACAAATGTGACCAACAACAATAA 531 0.4595 MCLPSTTWFQASLWGSSREGQGVWNFDWNWWGYGLDLLKNNPSSQHHHSNDLLGVVCAIASCFSYASWLIIQAKMTKEYPSHNSSTALMLTAAAAIQATVFAFCSERDLSQWKLGAVMIVCGLFAVLWGKNKEMKKVAQLVPSEIIQQQQQEDQAIQVVVTSTPVVINHDKCDQQQ 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212107g00006 176 PANTHER WAT1-RELATED PROTEIN 42 115 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212107g00006 Stsc-Chr212107 30755 31671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212107g00006 31 114 Nodulin-like Gene Family AT1G09380 35.714 7.35e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212107g00006 - - gmx:100809587 88.9669