Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212107g00005 ATGGAGAAATTGAACCTGACAAGTGCGGCAGGGAAAGCAAAGGTAATAGGAACAATAGTTGGGATTGGGGGTGCAATGTTGATGACATTCTACGAAGGCGTACAAGTTAAGATGCTATCCTTCCACATTAACCTCTTCAATAACCATCACGGAAGCGGAGCCCATGGTGGTAGTGGTGGCTCCTTGTTCTTGTTGGGCGCTCTCTCATCCTTGTTGAGCAACGCCTCTTATGCACTGTGGCTCATCATTCAGGCAAAGATGAGCAGAGCTTATCCGTATCCATACTCCATCACTTCCCTCATGTGTGCAATGGCAGCTCTCTTATCCACTCTCTTTACATTTTGCATTGACAGCAAGGATTTGAGTCTGTGGAAGCTCGGTTGGAATGTTAGGCTACTCACTGTAGCTTATTCGGGTATAGTAGTTTCCGGAGTGATGGTGGTTGTGATATCGTGGTGCATACGCAAGAGAGGCCCATTGTTTGTCTCTGTTTTTGTCCCTCTCATGCTCGTAGTTGTTGCCTTTGCTGGATCCACCATTCTTGACGAGAACCTATACCTTGGAAGCATAATTGGATCATTGTTGATTGTTTGCGGCTTATACTTGGTTCTATGGGGTAAGAGCAAAGAGGCCGCGGTCAGGAATCAATTAGCAGCACCACAACAATAG 669 0.4634 MEKLNLTSAAGKAKVIGTIVGIGGAMLMTFYEGVQVKMLSFHINLFNNHHGSGAHGGSGGSLFLLGALSSLLSNASYALWLIIQAKMSRAYPYPYSITSLMCAMAALLSTLFTFCIDSKDLSLWKLGWNVRLLTVAYSGIVVSGVMVVVISWCIRKRGPLFVSVFVPLMLVVVAFAGSTILDENLYLGSIIGSLLIVCGLYLVLWGKSKEAAVRNQLAAPQQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212107g00005 222 Pfam EamA-like transporter family 65 204 IPR000620 GO:0016020
Stsc212107g00005 222 SUPERFAMILY Multidrug resistance efflux transporter EmrE 102 208 - -
Stsc212107g00005 222 PANTHER WAT1-RELATED PROTEIN 1 211 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212107g00005 Stsc-Chr212107 28993 29748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212107g00005 1 210 Nodulin-like Gene Family AT1G68170 46.667 1.54e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212107g00005 - - aprc:113852527 261.151