Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212107g00004 ATGGCAAATATATGGAAGGTGGCAAAACTTCCAATTTTGCTGATGGTGGTTGCTCAGGTAGCAAATTCATGGGCGTATGTTCTGTACAAGCTTGCTGTGAACGATGGCATGAGTCAAAGAGTAGTTGTTGCTTACCGCTACATCTTTCCTACTGCTTTCATTTCTCCTCTTGCTTATATTCTCGAGAGGAAGACAAGAACAAAGATGACTAAAACTATTCTCTTTCAATCCTTCTTGTGTGGTTTATTCGGGTATGGATTCTTTTTTAAGGTACGTTTATTTGAGGTGAAGTAG 294 0.3946 MANIWKVAKLPILLMVVAQVANSWAYVLYKLAVNDGMSQRVVVAYRYIFPTAFISPLAYILERKTRTKMTKTILFQSFLCGLFGYGFFFKVRLFEVK 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212107g00004 97 PANTHER WAT1-RELATED PROTEIN 10 84 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212107g00004 Stsc-Chr212107 27771 28238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212107g00004 6 84 Nodulin-like Gene Family AT1G09380 43.038 2.52e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212107g00004 - - gmx:100788378 113.62