Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212087g00004 ATGGCACCTAAGACGCTTCTTCCTATATCTATGAAGCACAAGAGAGGTGCTGCAATTGCTTTGGATCATTCACCACCACCACCACCATTTCCCCTTTCTTCAATTCCATCTGCAACAACAATGGTGGTCAAAGGAATTGAAAACGATGACGTTTCCGCAAGGCTCCTTTCACGTTCTCCGTCTTCGTCTTCTTCGGATGAGGTAAAGACCGTTTTGCCCTCCAAGAATGGAAATGCGATCAGTCAGAATAAGAGGAGAAGGCGGAATGCGAGTGAGGATTCGTTGCCTTCGATCTCCAATGACAATGGGGATGATGATCGGGGTCATGGTGATGATAGAAAGTTTTCTTCTTCTTCAATTGGGGAAGAAGTTAGGCATGTTGCATCTGAGACCTTTCTATTGACAAGGCTTTTCGTGATCATGTTGTCATACCTTGGGATAGGCTACAAATGGATCATACAATTCCTTGCACTTGGTTGTTATGCAGTTATGATTTTCCCAGGAGTTATTCAAGTTGGTTATTACTATTTCTTTGACAGGCAGATACGCAGAAGCATAGTGTACGGAGATAAACCACGAAATCGGCTTGATTTGTATATACCGAAAGATAGCAATGGTCCAAAACCAGTTGTCGCATTTATTACTGGTGGAGCCTGGATTATTGGTTACAAAGCATGGGGTTCTCTTCTTGGGAAACAGTTATCAGAGAGAGATATCATTGTGGCATGCATTGATTACAGAAATTTTCCTCAAGGAACCATGAGTGATATGCTAGCTGATGCTTCCGAAGGCATCTCGTTTGTGTGCAATAACATTGCAAAATGGGGGGGTGACCCTGACAAAATTTACCTAATGGGGCAGTCAGCCGGGGCGCATATTGCCGCATGTGCGATTGTGGAGCAAGCAATCAAAGAGGCTGCCAAAGAAGAGGTTTCATGGAGTCTTTCCCAGATTAAGGCTTATTTTGGATTGTCCGGAGGGTATAATATATTTAACCTGGTAGATCATTTCCACAACAGAGGTCTTTATCGTTCGATCTTTTTAAGCATAATGGAAGGAGAGGAATCCCTAAAACGTTTTTCACCAGAAGTAATGGTTCAAGATTCAAACATGGCAGATGCTGTTAAACATCTACCTCCTATAGTTCTTTTTCACGGCACCGGAGATTATTCGATACCATCAGATGCCAGTACATCATTTGCTGAAACTCTTAAAAAGCTTGGAGTCAAAGCTGAAGCAATTCTCTATGAAGGGAAGACACATACAGATGTGTTTCTTCAGGATCCCATGAGAGGTGGCACGGATGCTATGTTCGAAGATCTAGTCAGCTATGTTCATGCTAACGATCCCGAGGCCCGCGCCAAAGATGCCCTGGCTCCTCCAAGGAGGCGCCTCGTACCCGAATTCATGTTGAAATTGGCTCATGCTGTTAGTCCTTTCTAG 1443 0.438 MAPKTLLPISMKHKRGAAIALDHSPPPPPFPLSSIPSATTMVVKGIENDDVSARLLSRSPSSSSSDEVKTVLPSKNGNAISQNKRRRRNASEDSLPSISNDNGDDDRGHGDDRKFSSSSIGEEVRHVASETFLLTRLFVIMLSYLGIGYKWIIQFLALGCYAVMIFPGVIQVGYYYFFDRQIRRSIVYGDKPRNRLDLYIPKDSNGPKPVVAFITGGAWIIGYKAWGSLLGKQLSERDIIVACIDYRNFPQGTMSDMLADASEGISFVCNNIAKWGGDPDKIYLMGQSAGAHIAACAIVEQAIKEAAKEEVSWSLSQIKAYFGLSGGYNIFNLVDHFHNRGLYRSIFLSIMEGEESLKRFSPEVMVQDSNMADAVKHLPPIVLFHGTGDYSIPSDASTSFAETLKKLGVKAEAILYEGKTHTDVFLQDPMRGGTDAMFEDLVSYVHANDPEARAKDALAPPRRRLVPEFMLKLAHAVSPF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212087g00004 480 Gene3D alpha/beta hydrolase 178 430 IPR029058 -
Stsc212087g00004 480 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 115 440 - -
Stsc212087g00004 480 MobiDBLite consensus disorder prediction 53 117 - -
Stsc212087g00004 480 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 178 429 - -
Stsc212087g00004 480 MobiDBLite consensus disorder prediction 17 36 - -
Stsc212087g00004 480 MobiDBLite consensus disorder prediction 100 117 - -
Stsc212087g00004 480 MobiDBLite consensus disorder prediction 54 84 - -
Stsc212087g00004 480 Pfam BD-FAE 196 404 - -
Stsc212087g00004 480 SUPERFAMILY alpha/beta-Hydrolases 180 449 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212087g00004 Stsc-Chr212087 15528 20420 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212087g00004 19 480 Carbohydrate Esterase AT1G26120 63.843 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212087g00004 K15889 - gmx:100790850 630.557