Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212076g00005 ATGGAACCCTATAAAGGACAAGGCGGCATTCAAATGCTGCTATCTGCTGAACAAGAAGCACAACTTATTGTTTCCAATGCAAGAACCTTGAGGAATAAAAGATTGAAGCAGGCACAAGAAGAAGCTGAGAGGGAAGCAGCACAATACAGATCTCAAATGGAAGAAGAATACCAAAAGTCAATCTCAGAGACCACTGGAAGCTCTGGATCCAATGTAAGAAAGCTTGAGGAGGAGACAGATGCCAATATAAGAAATATAAAGAGATCAGCTTCAAAGGTCTCTTCAGATGTTGTTGATATGATGCTCAAATATATTTCAAATGTTAAAGTTTAA 333 0.3844 MEPYKGQGGIQMLLSAEQEAQLIVSNARTLRNKRLKQAQEEAEREAAQYRSQMEEEYQKSISETTGSSGSNVRKLEEETDANIRNIKRSASKVSSDVVDMMLKYISNVKV 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212076g00005 110 MobiDBLite consensus disorder prediction 37 52 - -
Stsc212076g00005 110 NCBIfam V-type ATPase subunit G 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc212076g00005 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc212076g00005 110 Coils Coil 32 59 - -
Stsc212076g00005 110 Gene3D - 2 110 - -
Stsc212076g00005 110 MobiDBLite consensus disorder prediction 53 72 - -
Stsc212076g00005 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc212076g00005 110 MobiDBLite consensus disorder prediction 37 77 - -
Stsc212076g00005 110 FunFam V-type proton ATPase subunit G 3 110 - -
Stsc212076g00005 110 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 11 59 IPR028987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212076g00005 Stsc-Chr212076 16731 17915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212076g00005 8 108 Primary Pumps ATPases(2) AT4G23710 51.485 7.39e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212076g00005 K02152 - gmx:100818549 160.614