Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212071g00002 ATGGATCCAAACCCTAACAAGGAGGTTCTCCGTGAATTCCCCTACCTTTTCCGCCTCTACAAAGACGGAACCATCGATCGTTTCGCCGGCACTGACTCTACACCTACCGGCACCGACCCACTCACCAACGTCCAATCCAAAGACGTCACGATCAACCCCCAAACCGGGGTCGCCGCCCGCCTCTACCTCCCACCAAACCCCGCCGGAAAACTCCCTCTCCTCATCTACATCCACGGCGGCGCCTTCTGCATCTGCACTCCCTTCAACAACACCTACCACCGCCACCTCAACACACTCGCCGCCGAGGCCAACGCCGTCGTTGTCTCCGTCCACTACCGCCTCGCACCGGAACACCCCCTCCCCATCGCATACGACGACACCTGGGAAGCCATCCAGTGGACCGCCACGCACGCCGCCGCACACGGCGGCGGCCCTGAGCCCTGGCTCAACGACCACGCCGACTTCTCCCGCGTGTTCTTCGCCGGAGACAGCGCCGGCGCCAACTTAGCACATAACATGGCCATGCGTGGTGCCGTTGAGGGTTTCGGAGGGTTCAACCTGGACGGCGTCGTTTTGATCCATCCGTACTTCGGTAATGACCAGAAAGACGAACTGATAAGATTTCTTTACCCTTCTTATGTTGAACTAACCGACCCGAAAATCCACCCGGAGAAAGATCCGAACCTATCGGGTTTGGGATGCAAGCGCGTGTTGGTTTTGGTTGCTGAGAAAGATTTCCTGAGAGAGAGAGGAAGGAGTTACTACGAAACGGTTAAGGGAAGCGCGTGGAGTGGAACGGTTGAGATGGTTGAAACTGAAGGTGAAGGACACGTGTTCCATTTGTTTAACCCTTCCGGTGAAAAATCAGTGGACCTTGTTAAACGGATTGTCTCCTTCATTAAACAGGCCCAGTGCTAA 918 0.5621 MDPNPNKEVLREFPYLFRLYKDGTIDRFAGTDSTPTGTDPLTNVQSKDVTINPQTGVAARLYLPPNPAGKLPLLIYIHGGAFCICTPFNNTYHRHLNTLAAEANAVVVSVHYRLAPEHPLPIAYDDTWEAIQWTATHAAAHGGGPEPWLNDHADFSRVFFAGDSAGANLAHNMAMRGAVEGFGGFNLDGVVLIHPYFGNDQKDELIRFLYPSYVELTDPKIHPEKDPNLSGLGCKRVLVLVAEKDFLRERGRSYYETVKGSAWSGTVEMVETEGEGHVFHLFNPSGEKSVDLVKRIVSFIKQAQC 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212071g00002 305 Gene3D alpha/beta hydrolase 16 304 IPR029058 -
Stsc212071g00002 305 PANTHER ARYLACETAMIDE DEACETYLASE 13 284 - -
Stsc212071g00002 305 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 158 170 IPR033140 -
Stsc212071g00002 305 Pfam alpha/beta hydrolase fold 74 280 IPR013094 GO:0016787
Stsc212071g00002 305 SUPERFAMILY alpha/beta-Hydrolases 8 302 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212071g00002 Stsc-Chr212071 20773 22080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212071g00002 6 301 Carbohydrate Esterase AT3G48700 41.896 8.46e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212071g00002 - - mtr:11445231 441.425