Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212050g00002 ATGTCTGCGAAACAGCCAGCGCTCAACGGAGCCTACTACGGCCCCGCCATCCCCCCTCCTAAAACCTACCACCGCCCGGGACGCGGCGGGGGTCTCATCGGCTGCTGCTGCGGCTGCCTCTTCAGCCTCGTCTGCAAGCTCATTATCTCCATCGTCGTGGTCATCGGCATCGCCGTCTTGGTGTTCTGGCTCATCGTTCGCCCCAACGAGGTGAAGTTCCACGTCACCGACGCATCACTGACGCAGTTCAACTACAGCGGCAACACCCTCAAGTACAATCTTGCTCTGAACTTCACCATCCGAAACCCTAACAAGAAGCTCGGCATCTACTACGACTCCATCGAAGCGAGAACGCTGTTTCATGATGCAAGGTTTGACTCTGACCTTCTGCCTACGTTTTACCAGGGGCACAAGAACACCACTGTGCTGTCACACGTGTTCCAGGGCCAGCAGGTGGTGCCGCTTAGTGGCGACCAGGTTTCCGAGCTGAACAAGGAGCACACGAAAGGGGTTTATGATATCCGAGTGAAGTTGTATTTGAAGGTGAGATTCAAGCTGGGTAAATTCAAGACCAGGAAGGTGAAGCCAAGGGTTACTTGCGACTTGCAGGTACCTTTGACTTCTTCTAATGGCGGATCATCTTCTAATAATAGCTTTGAGACCACCAAGTGCGATTGGAGTCGCTGA 687 0.5386 MSAKQPALNGAYYGPAIPPPKTYHRPGRGGGLIGCCCGCLFSLVCKLIISIVVVIGIAVLVFWLIVRPNEVKFHVTDASLTQFNYSGNTLKYNLALNFTIRNPNKKLGIYYDSIEARTLFHDARFDSDLLPTFYQGHKNTTVLSHVFQGQQVVPLSGDQVSELNKEHTKGVYDIRVKLYLKVRFKLGKFKTRKVKPRVTCDLQVPLTSSNGGSSSNNSFETTKCDWSR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212050g00002 228 PANTHER OS05G0367900 PROTEIN 34 209 IPR044839 GO:0098542
Stsc212050g00002 228 MobiDBLite consensus disorder prediction 209 228 - -
Stsc212050g00002 228 Pfam Late embryogenesis abundant protein 98 200 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212050g00002 Stsc-Chr212050 6089 7187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212050g00002 65 212 SNARE and Associated Proteins AT1G32270 40.523 3.36e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212050g00002 - - gmx:100793187 300.827