Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212049g00005 ATGGCAGAGAACAAAGACAAGACGTGCGTCGTTTGTGAAGATAACAAGGGAGTTTGTTCGAAGGAATGCATTTACGAACCTCTCTTCCCTGCTGAGGACAACCAAAAAAGGCTCAACTATTTCACAATCATTGCACATTTGAATGCACTTAAGATAACAGAGTTGCTTCCGAATCTTCCAACCATGGAGGACAGAAGAGAAGCCATAAGTGCTCTTCTCTGTGATAATGATGATGATGCTGAAGAAGAGAGTGAAGATAATCATGATGCTGAAGAACAGAGTGCAAGCGGTGACAATGAGGATCTTATTCAAGAAGATCGAAAGCTTCCTCCGAAGAAGAGGAAGTTCAACCTGAGTAAACCCTACCAATCCCATGCGATGCAAAGCATATCTTTTGGTACTATTCAATTAGCAATTTCATGA 423 0.4137 MAENKDKTCVVCEDNKGVCSKECIYEPLFPAEDNQKRLNYFTIIAHLNALKITELLPNLPTMEDRREAISALLCDNDDDAEEESEDNHDAEEQSASGDNEDLIQEDRKLPPKKRKFNLSKPYQSHAMQSISFGTIQLAIS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212049g00005 140 MobiDBLite consensus disorder prediction 70 123 - -
Stsc212049g00005 140 MobiDBLite consensus disorder prediction 74 89 - -
Stsc212049g00005 140 Pfam Lateral organ boundaries (LOB) domain 9 75 IPR004883 -
Stsc212049g00005 140 MobiDBLite consensus disorder prediction 90 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212049g00005 Stsc-Chr212049 17500 18063 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc212049g00005 LOB 1.3e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212049g00005 - K11798 qsa:O6P43_013806 43.1282