Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212040g00001 ATGCCAGGCTTTCCTGTTGCAACTTGTGAAACTTCATATTCTAGAAGCACAAATCAAATAAGCTATCCAGATGCTCATGGACATTTATCTGCTGAAGAGGAGCTTGCTGCAGAAGAGAGTTTTGCAGTTTATTGCAAGCCTGTAGAATTCTACAATATTCTTCGGCGACGTGCTTTACGAAATCCTACATTTCTTCAGAGATGTTTGGACTATAGGATAAAGGCTAGACAAAGGAAGAGGATACAATTGACAGTTTTTCTGAGCGATACAGATGAAACTCAAGTATTGTTTCCCTTGTATATTTGTCTAGCAAGGCTGGCTTCTAAGGATGATGATGCCGAGAAGTACTCTGCTGTATATCGCATTGGTCGGGTTTTCATCTTTCGAGATCCTTCTGAAGTTGATGGTGATACTCAACACAAAGCAAACTTTTTGCTCCCTGACATTCATAGGCTAGCTCTGACAGCTAAATCTGGGTCACTCGTTCTCTTGTTTTTCACTGCTGTGGAGGACCCAAATTCCTCATCTGGGGTCAATGCAAGCCTGGTGCCTTTGGATCCGAGTTCATCTGAATCAAGAGATGGAGAGTACTGCTTATGTGGGAAAGTATCTCTCGAAAAAATTTTTCAGTCATGGGATGAATCTCCAAATTTAAGATTGGGACTTGAAGCTGAGGCTGTGTCAACTATTGATCTGCATCCATGTTTTCTAAAGTATGGTGTTCGAGATAAGGAGCAGAGCATCTCAGTTCAAGTGACAAATAATTTTGAGAATGGGTTTCCAAAGAGTACATCAAACCATTTGCAAATAAGAATGTATGCTCAACAGTGTGGGGCTAAGGAGAAATCTTCCCATTATACAAACATAACTGCACTAGCATCGCCATCATTATCTCGTATCATCCGGTTGAAGGAGGGCAACGTGAAGTTTAATTACAGGTATTACTATGATAAATTGCAGAGAACGGAAGTCACTGAAGATTTCTCCTGTCCGTTATGTTTGGTTAGATGTGCAAGCTACAAGGGCTTAAAATGCCACTTGCTCGCTTCACATGATCTTCTCAACTTCGAATTTTCGGCATGGGAGGAGTGCCCGTCTATAAACGTGTCTGTGAAAACTGATAACTGGAAATCTGAGATTTTTGCAAATATTATTGATCCCAAGTTGCACACTATTAACTTTTGTGCCAAACCACTTAAGAGAATATGTCCAGAGGATGAACCTTCTGAAAAAGCAAAGGCTGCAGATCCACTTGTCTTAGAATCCGAAATTCCAACTGGAGAGGGTGATCTTTTGGAGAAAGCTGATGGCATTGCAGGGGTTTCAAACAGAATTTTACAATTGCAACCTGATCAAGATTGTGTCCCACCTGAACCACCGACAGATGAGATTGGTCTTGCGAATCCTGCTGTGTTACCAGATGCCACAACAGGGAAGTCAACAATTCAGCGTTATAACATTGACCCACAAATCCTTTCTCAGTTGAGCAAGCGAAAATTCTATCACTCTCACAAATACCAGCCAATGGAACTTGAAGAAGTTCTATCAGAAGAAGATAGTGAGGATGAAGTTGACGACGAAGTAGCAAGTTTTGAAGATCGAAGGATGCTTGGTAATTTTGTCGACGTTACCGATGCTGAGAAAAAATTCATGCATATGTGGAACTCGTTTGTTCGAAAGCAACGGGTGCTAGCAGATGGTCATATTCCATGGGCATGTGAAGCTTTTGTAAAAGTTCATGGCTTTGAGCTTCTAGAGTGCCCCATATTGCCTTGGTGTTGGAGACTGTTTTCTATCAAATTATGGAATCATGGTCTTCTAGATGCAAGGACTATCAATTTATGCAGCCTTATTCTTCAACAGTATCAGAGGGAGAAATCAGCCCCAAATAGTTAA 1896 0.4114 MPGFPVATCETSYSRSTNQISYPDAHGHLSAEEELAAEESFAVYCKPVEFYNILRRRALRNPTFLQRCLDYRIKARQRKRIQLTVFLSDTDETQVLFPLYICLARLASKDDDAEKYSAVYRIGRVFIFRDPSEVDGDTQHKANFLLPDIHRLALTAKSGSLVLLFFTAVEDPNSSSGVNASLVPLDPSSSESRDGEYCLCGKVSLEKIFQSWDESPNLRLGLEAEAVSTIDLHPCFLKYGVRDKEQSISVQVTNNFENGFPKSTSNHLQIRMYAQQCGAKEKSSHYTNITALASPSLSRIIRLKEGNVKFNYRYYYDKLQRTEVTEDFSCPLCLVRCASYKGLKCHLLASHDLLNFEFSAWEECPSINVSVKTDNWKSEIFANIIDPKLHTINFCAKPLKRICPEDEPSEKAKAADPLVLESEIPTGEGDLLEKADGIAGVSNRILQLQPDQDCVPPEPPTDEIGLANPAVLPDATTGKSTIQRYNIDPQILSQLSKRKFYHSHKYQPMELEEVLSEEDSEDEVDDEVASFEDRRMLGNFVDVTDAEKKFMHMWNSFVRKQRVLADGHIPWACEAFVKVHGFELLECPILPWCWRLFSIKLWNHGLLDARTINLCSLILQQYQREKSAPNS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212040g00001 631 PANTHER POLYCOMB GROUP PROTEIN 28 629 - -
Stsc212040g00001 631 CDD VEFS-box_EMF2-like 497 622 - -
Stsc212040g00001 631 Pfam VEFS-Box of polycomb protein 489 616 IPR019135 -
Stsc212040g00001 631 CDD ZnB-Zn_EMF2-like 302 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212040g00001 Stsc-Chr212040 10072 20698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212040g00001 1 623 C2H2 Transcription Factor Family AT5G51230 47.385 6.56e-179 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212040g00001 - - adu:107473598 1133.63