Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212036g00003 ATGGCAAGTGAACAAAACAAGAAGCTGAAGCTGTATTCATATTGGAGAAGCTCTTGTTCCTTCCGAGTCCGAATTGCTCTCAACCTCAAAGGCCTAAAATATGACTACAAACCAGTCAATCTGTTGAAGGGAGAGCAATCTCACCCTGAATTCCTCAAGCTTAACCCTGTTGGTTTCGTTCCGGTTCTAGTGGACGGAGATTTTGTGCTTGCTGATTCCTTACCCATTATTATGTATTTGGACGATAAGTATCCTCAGCACCCTTTGCTTCCTAGTGATATTCATAAAAGAGCAATTAATTTCCAGGCTAGCCACATTGTTTCCTCGGCCATACAGCCTCTTCAAAACTTAAGTGTTCTCAATTACATTGGGGAAAAAGTTGGCCCTGACGAAAAGCTTGCTTGGGTCCAAAGTGTCCTTAGAAAGGGCTTCACAGCACTTGAAAAACTCTTGAAGGATCACACCGGAAGATATGCAACAGGAGATGAAATTTTCCTGGCTGATGTGTTTTTAGCGCCTCAACTTCATGCAGCATTTACGAGGTTCAGCATTCCAATGAATGAATTCCCTATTCTGTCAAGATTATACGAGACATATAATGCTACCCCGGCATTCCAGGAAGCTTTGCCGCAGAACCAACCAGATGCAGTACAGTAG 657 0.4307 MASEQNKKLKLYSYWRSSCSFRVRIALNLKGLKYDYKPVNLLKGEQSHPEFLKLNPVGFVPVLVDGDFVLADSLPIIMYLDDKYPQHPLLPSDIHKRAINFQASHIVSSAIQPLQNLSVLNYIGEKVGPDEKLAWVQSVLRKGFTALEKLLKDHTGRYATGDEIFLADVFLAPQLHAAFTRFSIPMNEFPILSRLYETYNATPAFQEALPQNQPDAVQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212036g00003 218 Pfam Glutathione S-transferase, N-terminal domain 11 87 IPR004045 -
Stsc212036g00003 218 SUPERFAMILY GST C-terminal domain-like 88 216 IPR036282 -
Stsc212036g00003 218 CDD GST_N_Zeta 9 81 IPR034333 -
Stsc212036g00003 218 PANTHER MALEYLACETOACETATE ISOMERASE 9 216 - -
Stsc212036g00003 218 NCBIfam maleylacetoacetate isomerase 10 216 IPR005955 GO:0003824|GO:0005737|GO:0009072
Stsc212036g00003 218 SFLD Glutathione Transferase (cytosolic) 9 199 IPR040079 -
Stsc212036g00003 218 CDD GST_C_Zeta 95 213 IPR034330 -
Stsc212036g00003 218 Gene3D Glutaredoxin 6 91 - -
Stsc212036g00003 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 218 IPR010987 -
Stsc212036g00003 218 Gene3D - 92 218 - -
Stsc212036g00003 218 Pfam Glutathione S-transferase, C-terminal domain 131 207 IPR004046 -
Stsc212036g00003 218 FunFam Glutathione S-transferase Z1 7 91 - -
Stsc212036g00003 218 SFLD Main (cytGST) 9 199 - -
Stsc212036g00003 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 88 IPR004045 -
Stsc212036g00003 218 FunFam Maleylacetoacetate isomerase 92 218 - -
Stsc212036g00003 218 SUPERFAMILY Thioredoxin-like 7 91 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212036g00003 Stsc-Chr212036 5345 8142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212036g00003 8 216 Glutathione S-transferase Gene Family AT2G02380 64.593 4.14e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212036g00003 K01800 - gmx:547590 352.829