Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212032g00002 ATGGGGCATGGTCGCGATGCCCAACAAGATGAACCTCCTGCAACAGCCTTGGAATTTAACCCTCCAGACAAAGATGTAATGAAGAAGCCTCCTCGTCGCAGTGATGACTCGCTAGTTATTGGGATGTATGTTGGATTAGCTACAGTTGGTATCTTCATCGTATGGTATACACATGGTTCCTTCTTGGGCATTGACCTTAGCACTGATGGACATACTCTCATCACTTACAACCAACTTACGAATTGGGGCCAATGTTCGACGTGGCAGAATTTCACTACTTCTCCATTCACAGCCGGTTCTCGAGTTGGAAAAGTGAAAGCCATGACCCTCTCCCTCTCCGTGTTGGTGGCCATTGAAATGTTCAACTCCCTCAATGCCCTTTTTGAGGATGGAAGCCTTTTTACGATGCCTCCTTGGGTCAACCCTTGGCTGCTTTTGGCAATTTCCATGTCATTTGGTCTCCACTTCTTGATCTTGTATGTGCCTGTCTTGGCACACGTGTTTAGCATCGTGCCGTTGAGCTTCAACGAGTGGCTTCTAGTCTTGGTAGTTGCATTCCCTGTGATTATAATCGAAGAAATTCTCAAGTTTGTGGGAAGGCATACAAGTGAATCTCAAACATCAAAAGCAACCACATCAAAGCGAAAATCAGAGTAG 657 0.4581 MGHGRDAQQDEPPATALEFNPPDKDVMKKPPRRSDDSLVIGMYVGLATVGIFIVWYTHGSFLGIDLSTDGHTLITYNQLTNWGQCSTWQNFTTSPFTAGSRVGKVKAMTLSLSVLVAIEMFNSLNALFEDGSLFTMPPWVNPWLLLAISMSFGLHFLILYVPVLAHVFSIVPLSFNEWLLVLVVAFPVIIIEEILKFVGRHTSESQTSKATTSKRKSE 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212032g00002 218 Pfam Cation transporting ATPase, C-terminus 10 198 IPR006068 -
Stsc212032g00002 218 Gene3D - 9 208 - -
Stsc212032g00002 218 PANTHER CALCIUM-TRANSPORTING ATPASE 10 209 - -
Stsc212032g00002 218 SUPERFAMILY Calcium ATPase, transmembrane domain M 10 201 IPR023298 -
Stsc212032g00002 218 MobiDBLite consensus disorder prediction 1 32 - -
Stsc212032g00002 218 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 6 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212032g00002 Stsc-Chr212032 6798 7886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212032g00002 10 218 Primary Pumps ATPases(2) AT1G07670 67.241 1.52e-104 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212032g00002 K01537 - jre:108989234 342.043