Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212029g00002 ATGGGCGCTCATTACCGACACCTCAAGCGTCGGTACATGTCTACTAATATTACCGACACTGTCTCCGACGCTTGGAGTGTCAGTACCTTACCGACATCCTCAGTTTGGATAATTTACATCGCCTTTTTGCCTCCCCTTCACTCCTCCTCCTCTGATCTCCATCGCCGTCGGCCGTCGCACTCCACCTCCACTCGGCCGTCTGTCCATTACGCCGTCCGCATCGTCTCAGTGCTCGTGTCGTGCACTCGTGCTTCTCTACGGCTCTGTCGCCGTCGCACACTCGCACTCCTCTGTACCGGCGCCGTCTCCTCATGCTCCACCTTTTCTGCCTATGCTCGTCCTCATCTCCTCTCTCTCAGTCGTGCCTCACTGCCTTTGTTTCCTTTGTCGCAGTCGTGTTTCAATACGGCCTCATCGTTCGTCTCTGCTCGGCGTTCCTCACCGCCACCCTGTGCCCCTATCTCTGCACATCTGCCGCCTGCGCTGCCTCCATCTCAGTCTTGGGCTAGCAATACTATCGGAAGTTCACTCATTCTTCTAGCTGGTAGATTTAAGGGAAAGAGGGGAGTGTTCCTGAAGCAACTTCCTTGTGGCTTGGTTCTTGTTACTGGTTCCCTAATGGGTTATTTGGTGATGACATGTTTGCATCTTTTGGTGAAGGAGATGGTGGAGCAGGAGTGCACGAGTCAAGGTGGTCCACGTAAGGCTCCCCCTATTGAGAACAAGCTCCCCTGCACTCTTGAAGAGATATATAAAGGGACCACCAAGAAGATGAAGATCTCTAGGGAAGTTATTGATGCTAGTGGGTGA 810 0.5309 MGAHYRHLKRRYMSTNITDTVSDAWSVSTLPTSSVWIIYIAFLPPLHSSSSDLHRRRPSHSTSTRPSVHYAVRIVSVLVSCTRASLRLCRRRTLALLCTGAVSSCSTFSAYARPHLLSLSRASLPLFPLSQSCFNTASSFVSARRSSPPPCAPISAHLPPALPPSQSWASNTIGSSLILLAGRFKGKRGVFLKQLPCGLVLVTGSLMGYLVMTCLHLLVKEMVEQECTSQGGPRKAPPIENKLPCTLEEIYKGTTKKMKISREVIDASG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212029g00002 269 SUPERFAMILY Translation proteins SH3-like domain 171 206 IPR008991 -
Stsc212029g00002 269 Gene3D - 227 269 - -
Stsc212029g00002 269 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 212 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212029g00002 Stsc-Chr212029 13790 18241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212029g00002 101 204 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 39.450 5.15e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212029g00002 K09510 - gmx:100797487 78.9517