Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212025g00002 ATGGACTTGTGGGTTGGTGTGAGAAAGAGGTATTGGAGATTTCCATTTTCCACCCCTCACCAACCCCAATTACAATCATCAACCAAAAACCCAACCAACGCCAACAAAAAGTTTCTACTACTTAGTCCTCACCAACCACTCTCCAAATCCCTTCATTCAAAATTTGAAAGCCTCTCCCTCAGCCATTGGATTAACAAGCACACGCCCCCAATAACAACAACAACACTAATGGGTAAGGTTTTTACTTTGGCTGATGTTTCTTCTCACAACCACCGCAAAGATTGCTGGCTCGTCATTCATGGCAAGGTTTATGATGTGACCAAGTTCTTAGAGGACCACCCTGGTGGGGATGAGGTCCTGTTGTCTTCCACAGGGAAAGATGCATCTAATGATTTTGACGATATCGGCCACAGCACCAGCGCAGTTGCCATGATGGATGAGTTCTACGTTGGGGACATCGATTCATCAACCATTCCATCCAATGTTAAGTACACTCCCCCAAAACAACCTCACTACAACCAGGACAAGACACCGCAGTTCGTCATCAAGCTTCTCCAGTTCCTACTCCCTCTTCTCATCTTGGGTTTGGCCGTTGGAATTCGTTTCTACACCAAATCATCATGA 624 0.4567 MDLWVGVRKRYWRFPFSTPHQPQLQSSTKNPTNANKKFLLLSPHQPLSKSLHSKFESLSLSHWINKHTPPITTTTLMGKVFTLADVSSHNHRKDCWLVIHGKVYDVTKFLEDHPGGDEVLLSSTGKDASNDFDDIGHSTSAVAMMDEFYVGDIDSSTIPSNVKYTPPKQPHYNQDKTPQFVIKLLQFLLPLLILGLAVGIRFYTKSS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212025g00002 207 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 109 116 IPR018506 GO:0020037
Stsc212025g00002 207 SMART Cyt_b5_2 81 154 IPR001199 -
Stsc212025g00002 207 Pfam Cytochrome b5-like Heme/Steroid binding domain 82 153 IPR001199 -
Stsc212025g00002 207 Gene3D - 74 159 IPR036400 -
Stsc212025g00002 207 PANTHER CYTOCHROME B5 76 204 - -
Stsc212025g00002 207 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 78 164 IPR036400 -
Stsc212025g00002 207 PRINTS Cytochrome B5 signature 113 127 IPR001199 -
Stsc212025g00002 207 PRINTS Cytochrome B5 signature 103 113 IPR001199 -
Stsc212025g00002 207 PRINTS Cytochrome B5 signature 141 153 IPR001199 -
Stsc212025g00002 207 PRINTS Cytochrome B5 signature 128 135 IPR001199 -
Stsc212025g00002 207 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 78 154 IPR001199 -
Stsc212025g00002 207 FunFam Cytochrome b5 type B 76 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212025g00002 Stsc-Chr212025 2016 5244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212025g00002 78 206 NADPH P450 reductases AT5G48810 67.176 3.54e-64 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212025g00002 K23490 - gmx:100500611 232.646