Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc212017g00001 | ATGGGGTTGAAATTTGCAAAGCAGGGACCACAAAAAGTTGATGACCTGAATTTACAGAATCACATGATCAATTACCTTACCAGGAATTTTATTCGAAACTTGGTATCCAAGCAACGGAGGCGGATGCTCATCGCCGGCTATGATCTCGACATGACATATATCACAGACAGAATATTAGCAATGTCATTTCCTGCGGAGCGAATGCGCGCAGTGTATCGAAATCCTCTATGGCAGGTCAAATCTGTGTTGGACATGACACACCATGAACATTATAAGATCTATAATCTCTGTATAGAAGAAAGTTATGATCCGGCAAACTTTCATGGACGTGTCGAAGCATACCCTTTCGACGATAACCATGTTCCTCCCCTTGAAATGATCAAAGATTTTTGTGAAAGTGTGCATTCATGGCTATCAAGTGATCCGAAAAATATTGCTGTTATTCATTGCATGGCAGGGAAGGGTAGAACTGGCTTAATGGTGTGTTCATACCTAATTTATTCTGGCATGTCAGCAGATGAGGCTCTTCAATTGTATGCAGAGAGAAGGACAACAAATAATGAAGGAGTATCAATACCAAGCCAACGCCGTTATGTAAGGTACTTTGAAAGCTTACTTTCTAGCCCCAGGGGCAAGGTGAGCTTGCCTCCACCATGTAGCAGAGAATTGCGCCGAATTCGCCTTTATGATACAGTTAACATCTATGCAATATTCTTTGTGATTTCAGAGCTGCAGGAGGAGGTTCCTAACCAGTGCTATCGGCCGCCGTTAACTGGAGATGTACGTGTGATATTCTATGAGAAATTGATAGGAGGCCGTCTCTTCTACTGCTGTTTTAATACATGTTTTGTTAAGAACAGCATATTACAGCTGGGAATAGAGGATTTGGACAAAGTTGGGAAGAAAGGAAGATCAATATGTGGAACTGGTTTTAGCTTGGAATTACTGTTTGGGCCTGCTAATTCATCAAGTGTATGCACTAGTGACAATGCTAGTGATATTTCATTGTGA | 1011 | 0.4154 | MGLKFAKQGPQKVDDLNLQNHMINYLTRNFIRNLVSKQRRRMLIAGYDLDMTYITDRILAMSFPAERMRAVYRNPLWQVKSVLDMTHHEHYKIYNLCIEESYDPANFHGRVEAYPFDDNHVPPLEMIKDFCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVCSYLIYSGMSADEALQLYAERRTTNNEGVSIPSQRRYVRYFESLLSSPRGKVSLPPPCSRELRRIRLYDTVNIYAIFFVISELQEEVPNQCYRPPLTGDVRVIFYEKLIGGRLFYCCFNTCFVKNSILQLGIEDLDKVGKKGRSICGTGFSLELLFGPANSSSVCTSDNASDISL | 336 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc212017g00001 | 336 | Pfam | C2 domain of PTEN tumour-suppressor protein | 254 | 317 | IPR014020 | - | |
Stsc212017g00001 | 336 | SMART | PTEN_C2_2 | 216 | 319 | IPR014020 | - | |
Stsc212017g00001 | 336 | Gene3D | Protein tyrosine phosphatase superfamily | 26 | 210 | IPR029021 | - | |
Stsc212017g00001 | 336 | Pfam | Tyrosine phosphatase family | 140 | 185 | IPR026893 | GO:0004721 | |
Stsc212017g00001 | 336 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 254 | 319 | IPR035892 | - | |
Stsc212017g00001 | 336 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 128 | 183 | IPR000387 | GO:0016311|GO:0016791 | |
Stsc212017g00001 | 336 | CDD | PTP_PTEN | 50 | 205 | IPR045101 | GO:0016791 | |
Stsc212017g00001 | 336 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 40 | 209 | IPR029023 | - | |
Stsc212017g00001 | 336 | ProSiteProfiles | C2 tensin-type domain profile. | 182 | 320 | IPR014020 | - | |
Stsc212017g00001 | 336 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 148 | 158 | IPR016130 | GO:0016311|GO:0016791 | |
Stsc212017g00001 | 336 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 46 | 207 | IPR029021 | - | |
Stsc212017g00001 | 336 | FunFam | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN | 27 | 209 | - | - | |
Stsc212017g00001 | 336 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 26 | 327 | - | - | |
Stsc212017g00001 | 336 | Gene3D | - | 241 | 322 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc212017g00001 | Stsc-Chr212017 | 1901 | 3857 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc212017g00001 | 257 | 322 | Protein tyrosine phosphatase (PTP) family | AT5G39400 | 63.636 | 2.39e-22 | 95.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc212017g00001 | K01110 | - | gmx:100809938 | 435.647 |