Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc212016g00007 | ATGCTTGAAACTCTGGACCTTTCCAACAATGCTATAACTGGTAATGTGCCTAGTGTCTTGTTTTCTAGGCTTTCGAAGCTTCGAGTTCTTAATTTGAGTGGTAACTCTATTGATGGTGGTTTTCCTGATTCCTTGTGGTCATTACCGAGCTTGCGTTTCATTGATGTGTCCAACAATAGCCTTACCGGTCATCTGCCGAAGTTTTTCGGTTCAAATGCTAGCTCTACTGATGCCACATTCAATCTCTCAAACAACTTATTCTTTGGAACTCTAAATATTTCGGCTAAGAAGTTTAGAATGATTGATCTGTCCGGTAATTATTTGGAAGGCGAGGTGCAAGGTGTTAGTCTTAGTAATGTTAGTTTAGCAAGGAATTGCCTGGAGAATGCTCCAAACCAGAGGGATGTTAGTGTTTGTAGAGTGTTTTATGTGAAGAGAAATCTACCCTTTCCAGAATATTCGACAGCGAAAAAATCTTCCGGAAAGAAATTGATATTCATTCTGGCAGGTGTATTTGGTGGGCTTGGATTTATTTTGCTTCTGGCATTGGCCCTCATACTGTTCTTAAAACTATGTGGCAGCCATAAAAGCTTGGAAGTTCAAAGGGGGACTGAAAGTGGAGGGCCTGTTCCGGAAGGGGCGAGTCCTATGCCACCTAAAGACCTTGCATTCGACATTGCTGTCGGGGAACCATTTACATATGATCAAATTCTCAAGTTGACTGGTAATTTTGCTGATGCAAATATCATGAAACATGGTCATTCTGGAGACCTCTTCTGGGGAGTAATGGAAAACGGAGCTACTGTCGTCATCAAGAAGGTTGATTTGAGTTTGTTCAAGAGAGAATCATATGTTGTGGAATTGGAATTGTTAAGCAAGGCTTCACATGCAAGATTGATCCCAATCTTGGGGCATTGCTTGGAGAATGAGAATGAGAAATGTATAGTTTACAAGTATATGCCAAATGGAGATTTGGCAAGTTCTTTGCAGAGAGTCACTGATGCAGATGGTAAATCAAAGTCCCTTGATTGGATCACAAGATTGAAAATCGCTACGGGAGCTGCTGAAGGCCTTGCTTTTCTACACGATTGCAGCCCTCCCCTCGCTCACAGAGATGTTCAAGCTAGCAGCATACTTCTTGATGATAAATTTGAAGTGCGACTCGGAAGTTTGAGCGAGGTTACCACCCAAGGAGATCTTCTTCCGGGTGTCATGAACAGGCTGTTCAGCAAGCCATCATCTTCTAATCAACCAAATTTTGGCACATCATCAGTGACTTGGGCAGGTGATGTTTATGGTTTCGGTAAGATTTTGCTCGAGCTTATTACCGGAAATACTGAGGTCAGCAAATCGGACGATGCCACCTCACGAGAGTGGTTGGAGCAAACCTTGCCTTACATTAGCATAGATGATAAAGAACGGATAACCAAGATCGTCGACCCTTCTTTGATAGTAGATGAGGATCTACTAGAAGAAGTATGGGCTATGGCAATTGTGGCAAGATCATGCCTGAATCCTAGGCCTTCGAAACGTCCTCCTATGAGACACGTCCTCAAAGCGCTGGAAAATCCGTTGAAGGTTGTAAGAGAAGAAAATGCAAGCTCGGTGAAGTTGCGAGCAACTTCGTCTAGGAAGTCTTGGAGCACCGGATTGTTCGGTAGCTGGAGACAGAGCTCATCAGATAGTGTTACTGCAACAAACAAAGATAGTTCAAGTGGGACTAAACAATCAGGGAAAGTAAGTTCCCAAGGAAGTGGTGTAATGGATCACTCATCTTCTAATAAAAGATCATCCAAATCCAATGAAGTTTTCCCTGAACCATTGGGAACACATGATGTGGAGATTGGTGAGGGAAGATGA | 1860 | 0.429 | MLETLDLSNNAITGNVPSVLFSRLSKLRVLNLSGNSIDGGFPDSLWSLPSLRFIDVSNNSLTGHLPKFFGSNASSTDATFNLSNNLFFGTLNISAKKFRMIDLSGNYLEGEVQGVSLSNVSLARNCLENAPNQRDVSVCRVFYVKRNLPFPEYSTAKKSSGKKLIFILAGVFGGLGFILLLALALILFLKLCGSHKSLEVQRGTESGGPVPEGASPMPPKDLAFDIAVGEPFTYDQILKLTGNFADANIMKHGHSGDLFWGVMENGATVVIKKVDLSLFKRESYVVELELLSKASHARLIPILGHCLENENEKCIVYKYMPNGDLASSLQRVTDADGKSKSLDWITRLKIATGAAEGLAFLHDCSPPLAHRDVQASSILLDDKFEVRLGSLSEVTTQGDLLPGVMNRLFSKPSSSNQPNFGTSSVTWAGDVYGFGKILLELITGNTEVSKSDDATSREWLEQTLPYISIDDKERITKIVDPSLIVDEDLLEEVWAMAIVARSCLNPRPSKRPPMRHVLKALENPLKVVREENASSVKLRATSSRKSWSTGLFGSWRQSSSDSVTATNKDSSSGTKQSGKVSSQGSGVMDHSSSNKRSSKSNEVFPEPLGTHDVEIGEGR | 619 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc212016g00007 | 619 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 2 | 522 | - | - | |
Stsc212016g00007 | 619 | Gene3D | Transferase(Phosphotransferase) domain 1 | 320 | 545 | - | - | |
Stsc212016g00007 | 619 | Pfam | Protein tyrosine and serine/threonine kinase | 252 | 520 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc212016g00007 | 619 | SUPERFAMILY | Protein kinase-like (PK-like) | 227 | 521 | IPR011009 | - | |
Stsc212016g00007 | 619 | Pfam | Leucine rich repeat | 2 | 61 | IPR001611 | GO:0005515 | |
Stsc212016g00007 | 619 | MobiDBLite | consensus disorder prediction | 549 | 619 | - | - | |
Stsc212016g00007 | 619 | MobiDBLite | consensus disorder prediction | 549 | 604 | - | - | |
Stsc212016g00007 | 619 | ProSiteProfiles | Protein kinase domain profile. | 244 | 526 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc212016g00007 | 619 | SUPERFAMILY | L domain-like | 2 | 129 | - | - | |
Stsc212016g00007 | 619 | Gene3D | Phosphorylase Kinase; domain 1 | 223 | 319 | - | - | |
Stsc212016g00007 | 619 | Gene3D | Ribonuclease Inhibitor | 1 | 147 | IPR032675 | - | |
Stsc212016g00007 | 619 | FunFam | Predicted protein | 218 | 319 | - | - | |
Stsc212016g00007 | 619 | PRINTS | Leucine-rich repeat signature | 24 | 37 | - | - | |
Stsc212016g00007 | 619 | PRINTS | Leucine-rich repeat signature | 2 | 15 | - | - | |
Stsc212016g00007 | 619 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 320 | 541 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc212016g00007 | Stsc-Chr212016 | 28232 | 31641 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc212016g00007 | 2 | 71 | Miscellaneous Gene Families | AT2G16250 | 47.143 | 1.50e-06 | 49.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIV | Stsc212016g00007 | PK_Tyr_Ser-Thr | 3.8e-19 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc212016g00007 | - | - | gmx:100815313 | 781.171 |