Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212007g00004 ATGGAGTCTAAAGTTGAGATTGTATCTAAGGAAATTGTAAAGCCATCGTCTCCAACCCCTAATCACCTCAAAGACTTCAAAATCTCCCTCCTTGATGAAATGGTTCCTCCAACCTACGTTCCAATTATTTTGTTCTACTGTGCCACCACTGATGATAGCAGTTCCATTATTGGAGCTCGAGATTTCGAAGTCAGATCCAACAAGTTAAAGCTTTCATTATCCAAAATCCTCTCTCTTTACTACCCATTTTGTGGAAGATTGAAAGCCACCTCATCATCCTCCGTTGATTGCAACGATGAAGGTGTACTTTACATTGAGTCTAAGATCCCTACAAACCTTTCAGATACTCTCAAATTGCCTCAGTCTCAAATACAAGAGCTTCTTTTGCCATTTGACCCATATGATGTTCCTAGTACAATGGAAAATTATGACAGAAACATGGTGAACATGGCGGTTCAATTAAGTGAATTCAAATGTGGGGGTATTGCACTTGGTGTGTGCCTCTCACACAAGTTAGCAGATGCTGCAGCTACCGCATCGTTTCTCAATTCTTGGGCCGAAACTGCAAGGGATATTGATAATGGAGGGAATGGCAACATTGTAGAACCACCTCAAATGGATGCATCGTTGATTTTCCCGCCAAGGGGAATAGAATTAGCCATAAATGACCTCATGGTTGGTGGTGACCATGATGAAAAGCTGGTAACGAAGTGCTTCTTGTTCAACGCTACAAACATATGCAGTTTGAAAGCTAGATTTGGTGACTTCAACGCCACTCGTGTTGAAGCTATCACAGCACTCATATGGAGATCAGCTATACAGGCGGCAAAAGCAACATCCGAGGAAGAAAACATAGATTTATTGCGTCGCGCGTTTTCGCAGAAGAAAGGGGTTGCTGCGTTTTCGAAGGAGAAGAAGATGAGGTTGCCGCGACGTCACATATGGAGGTGGAGGGAGAAAGCGAGGAAGAAAGAAGAAGAAAGAGGCATCGGCGACGCAACTGGTAGTGGCGGTGGGGGAGAGAGAGGGGCGATGGAAGCTCTTATTAACGCCCCGCGGCCGCTCTCGCGACCGGTTCTGAAATCCTTAATTTTTAAAAACAGAGAGTATCGTTGTAGAGGAATCCAAACCAATTGTGAGATTGACAACGGGGTTCGTCAACAAGAAAGGTTCACAAAGCTTGCAACCAATTAA 1194 0.4414 MESKVEIVSKEIVKPSSPTPNHLKDFKISLLDEMVPPTYVPIILFYCATTDDSSSIIGARDFEVRSNKLKLSLSKILSLYYPFCGRLKATSSSSVDCNDEGVLYIESKIPTNLSDTLKLPQSQIQELLLPFDPYDVPSTMENYDRNMVNMAVQLSEFKCGGIALGVCLSHKLADAAATASFLNSWAETARDIDNGGNGNIVEPPQMDASLIFPPRGIELAINDLMVGGDHDEKLVTKCFLFNATNICSLKARFGDFNATRVEAITALIWRSAIQAAKATSEEENIDLLRRAFSQKKGVAAFSKEKKMRLPRRHIWRWREKARKKEEERGIGDATGSGGGGERGAMEALINAPRPLSRPVLKSLIFKNREYRCRGIQTNCEIDNGVRQQERFTKLATN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212007g00004 397 Gene3D - 1 219 IPR023213 -
Stsc212007g00004 397 Gene3D - 231 293 IPR023213 -
Stsc212007g00004 397 PANTHER F21J9.9 6 282 - -
Stsc212007g00004 397 Pfam Transferase family 4 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212007g00004 Stsc-Chr212007 11424 14230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212007g00004 4 211 Monolignol Biosynthesis Gene Families AT5G48930 28.571 9.29e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212007g00004 - K13065 gmx:100792323 271.937