Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212006g00001 ATGGCCTCCTCACCTACACCCTCATCTCCTAAACTAATTGCTCCAATTACCACCATCATCGCTACCACTGCCACAACGACAACAACAAACACCACAAACGACGTCGTTTCGCCAACCAAGAAACCCCAACCGATCCCATGGACTCACCAGGAGACCATTAACCTAATCCGGGCGTACCAGGAGAAGTGGTACGCCTTGAAGCGGGGCCCACTCCGTGCCAGCCAGTGGGAAGAGGTCGCCGTCGTAGTCGCCGCCCGCTGCGGCTACGACTACAGCCATCCTTCTAAGTCCGCCGTCCAGTGCCGTCACAAGATGGAGAAGCTCCGCCAGCGCCACCGAGCCGAGAAGAAGCAACGCCTTCTCACCACCTCCCGCGTCCCATCCCGTGCCACGTGGCAGTACTATGGCCTCATGGATGAGCTGGAGCGCGGCCCGATGCCAATCTCGGCCCGGCCCGTAACCTCCATGGCGCCACCGGGCGGCAACGACAACGACGACAGTAACTACGGAAGTTTCTATCAGAATGACGATGATTTCATTGACGCAAATGAAGAAAGGGAGAATTATATAAAATCAAAGTGTGTTAATCATCTTCTTAGCAAGAAACCCTCAATGAACAAGTGTAGAGGGGTTTTGAGGGACCATATTCTTCCAAAAGGATTCTGGAGCGTTGATGATGGTGACTATGGTGATGATGATGATGATGTTAATTATCTTGATGATGATGATGATGATGATGATGATTATGGTGGCGGTGGTGATGATAGGAAAGGATTGTTAATGGTGGATGAGAGGGCTTTGGTTTCGGGTTTGAGTACAGAGATAAAAGATTTCACTGAGAGGTTCATTGGGATGGAGAATTTGAAGATGAGGATCGTGAAGGAAACTGAGAGGAGGAGGTTGGAGATGGAGAACAGGCGGATGGAGATGATCCTTGAGTCGCGGCAGCGGACCATCGATTCCATTGGGCGCGCGTTCGGGTCATCCAAGAGGCTGAAGATGAGTGAAGGAAGCTGA 1017 0.5172 MASSPTPSSPKLIAPITTIIATTATTTTTNTTNDVVSPTKKPQPIPWTHQETINLIRAYQEKWYALKRGPLRASQWEEVAVVVAARCGYDYSHPSKSAVQCRHKMEKLRQRHRAEKKQRLLTTSRVPSRATWQYYGLMDELERGPMPISARPVTSMAPPGGNDNDDSNYGSFYQNDDDFIDANEERENYIKSKCVNHLLSKKPSMNKCRGVLRDHILPKGFWSVDDGDYGDDDDDVNYLDDDDDDDDDYGGGGDDRKGLLMVDERALVSGLSTEIKDFTERFIGMENLKMRIVKETERRRLEMENRRMEMILESRQRTIDSIGRAFGSSKRLKMSEGS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212006g00001 338 ProSiteProfiles Myb-like domain profile. 46 109 IPR001005 -
Stsc212006g00001 338 FunFam Trihelix transcription factor ASIL2 47 114 - -
Stsc212006g00001 338 MobiDBLite consensus disorder prediction 160 174 - -
Stsc212006g00001 338 Pfam Myb/SANT-like DNA-binding domain 46 141 IPR044822 -
Stsc212006g00001 338 MobiDBLite consensus disorder prediction 233 255 - -
Stsc212006g00001 338 MobiDBLite consensus disorder prediction 154 175 - -
Stsc212006g00001 338 MobiDBLite consensus disorder prediction 233 250 - -
Stsc212006g00001 338 Coils Coil 293 313 - -
Stsc212006g00001 338 Coils Coil 98 118 - -
Stsc212006g00001 338 Gene3D - 47 114 - -
Stsc212006g00001 338 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 37 320 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212006g00001 Stsc-Chr212006 2889 3905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212006g00001 47 141 Trihelix Transcription Factor Family AT3G14180 28.421 4.28e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc212006g00001 Myb_DNA-bind_4 7.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212006g00001 - - adu:107474774 494.967