Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211997g00001 ATGGCCTCATCGAGTGGAAACTCATCCATATCCACCAAATTTTGTGGCTCTGAGGAGGATTTACGGCAACTGATGGATCAGAGGAAGAGGAAGAGAAAGCAGTCGAATCGCGAATCGGCGAGGAGATCTAGAATGCGGAAGCAAAAGCACTTGGATGACCTAGTTGCTGAAGTTGAGAGGCTTAGGAAGGAGAACAATGAGATCCTCAATGGAGTTAAGATCACAACACAAAAGTTCCTCAATCTTGAGGGAGAAAACTCCATCTTAAGGGTCCAAATGAGTGAACTTAACAAAAGGCTTCAATCACTCAATCATATGCTTAGCTTCTTCAACAACAATAACATCATCACTGCAAGCACTATTGGTAGTGAATTCTACCATGATTATAATTTCATGAATAATAATCACCACATTAATAACATGTTGTACCTTAACCAACCCATCATGGCATCTTCAAATCACATGTTTGAGTGGTGA 477 0.4067 MASSSGNSSISTKFCGSEEDLRQLMDQRKRKRKQSNRESARRSRMRKQKHLDDLVAEVERLRKENNEILNGVKITTQKFLNLEGENSILRVQMSELNKRLQSLNHMLSFFNNNNIITASTIGSEFYHDYNFMNNNHHINNMLYLNQPIMASSNHMFEW 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211997g00001 158 Coils Coil 93 113 - -
Stsc211997g00001 158 Coils Coil 44 71 - -
Stsc211997g00001 158 SMART brlzneu 24 88 IPR004827 GO:0003700|GO:0006355
Stsc211997g00001 158 SUPERFAMILY Leucine zipper domain 28 81 IPR046347 GO:0003700|GO:0006355
Stsc211997g00001 158 Gene3D - 26 79 - -
Stsc211997g00001 158 CDD bZIP_plant_GBF1 29 79 IPR045314 GO:0003700|GO:0006355
Stsc211997g00001 158 FunFam BZIP transcription factor 26 77 - -
Stsc211997g00001 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 26 89 IPR004827 GO:0003700|GO:0006355
Stsc211997g00001 158 Pfam bZIP transcription factor 28 68 IPR004827 GO:0003700|GO:0006355
Stsc211997g00001 158 MobiDBLite consensus disorder prediction 1 51 - -
Stsc211997g00001 158 MobiDBLite consensus disorder prediction 19 33 - -
Stsc211997g00001 158 MobiDBLite consensus disorder prediction 1 16 - -
Stsc211997g00001 158 PANTHER BZIP TRANSCRIPTION FACTOR 44 14 153 - -
Stsc211997g00001 158 Coils Coil 18 38 - -
Stsc211997g00001 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 31 46 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211997g00001 Stsc-Chr211997 12827 13303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211997g00001 24 156 bZIP Transcription Factor Family AT4G34590 51.471 7.71e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc211997g00001 bZIP_1 1.9e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211997g00001 K25786 - pvy:116127473 170.244