Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211990g00002 ATGATGCACATGACCTTCTACTGGGGCAGGTACGTCACGATTCTCTTCGATTCCTGGAAGACCGATTCGTGGCTGAGTTACGCGCTGAGCTTGTTGGCGTGTCTCTTGGTCTCGATTTTCTATCAGTATCTTGAGAACCGCCGCATTCGCTTGAAGCTGTTCGCCGCCGGGATTCCGTCTTCGACGGCGGCGCCTGAGATCGAGACGCCTCTGCTGCGACGGAAGTTGGCGGGGGAGAGAGCGAGGTTGGGAGTGAAGGTTGCGGCATCGGTGCTGTTTGGGGTAAGCTCGGCGATCGGGTACTTGCTTATGCTGGCAGTGATGTCATTCAACGGTGGAGTGTTTCTTGCCATCGTTTTAGGTCTTGCAATTGGTCATTTTATTTTCAGGAATGAGGGTGAAGCTTCCGTTGTTGTTGATAGTTCTTGTGCCTGTGCTTAG 441 0.5306 MMHMTFYWGRYVTILFDSWKTDSWLSYALSLLACLLVSIFYQYLENRRIRLKLFAAGIPSSTAAPEIETPLLRRKLAGERARLGVKVAASVLFGVSSAIGYLLMLAVMSFNGGVFLAIVLGLAIGHFIFRNEGEASVVVDSSCACA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211990g00002 146 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 136 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc211990g00002 146 Pfam Ctr copper transporter family 4 129 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211990g00002 Stsc-Chr211990 16193 17412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211990g00002 1 146 Inorganic Solute Cotransporters AT5G20650 54.000 7.76e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211990g00002 K14686 - gmx:100815028 202.986