Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211985g00002 ATGGGGATGGTAATGGAGTTAGTGAAGTTGGTTTGTTCCATTGGTGTGGTTGGAACGGTGCTATGGTTGGTTTATGTGTATGGAAATGAATGGGTAAAGTCTCAGAGAGTTAGAAGGAAGCTAAGAATGCAAGGTATAAGTGGGCCACCACCTTCATTTCTTCATGGGAATCTGCTTGATATGCACCAAATCACTGCTGCATCACAACAAGGCAAAGTTGCTGGGAGTAGTGGTGACCACACTCATGACTTCACCGAATCCCTCTTCCCCTATTTTGAGTTCTGGCGAAAACAATACGGTACCTTGTACACTTACTCTACAGGGATAAAACAACACCTATATGTGAATAGGCCAGAAATAGTGTCAGAAATGAACAAGTTAATGACTCTGGATTTGGGTAAGCCTAGTCATATAACAAACAACCTTGCTTCCCTTCTAGGAAATGGCATTCTCAGAGCTAATGGGATTAGCTGGTCGCATCAGAGAAAACTTGTTGCTCCTGAGTTCTACATGGAAAAAGTTAAGGGTATGGTGGACCTGATGATAGAGTCAGCGCAACCATTGTTAACAAAATGGGACAGAGCTATTGAGGCCAAAGGCAGTGATGAAGTTGAAATTGAAGTTGATGAAGATTTGAGGAGCTTAGCAGCTGATGTTATTTCAAGAGTTTGTTTTGGCCATTCGTATTCCAAAGGAATTGAAGTTTTCTCCAAGCTTAGGCTAATGCAGAAGAAGATGTCCAAACATGGTGCCTTCCTTTTCGGAATCAAAGGTTTACGGGAAAAACTAAAGTATATATGGAGAGAGAAGGAAAATGAGATTGAGATTATGGAGAGGGAGAACATATACTTTGCTGGGCATGAAACCATTGCAGTTACTGCATCTTGGGCTTTGATGCTCCTTGCTGTGTATCCAGAGTGGCAAGATCGAGTAAGAAAAGAGGTTGCTCAAATTTTCTCCAATGGCTTACCAAATGCTGATGATCTTCCTCTCTTGAAAACGTTGACAATGGTGATACAAGAAGTGCTACGCTTATACCCGCCAGGAGCATTTGTATCAAGAGAGGTGTACAAAGATACCCAAATTGGAGAACTGAATGTTCCCAAAGGTGTTTGTTTATGGACACTAATTCCAACTCTGCATAGGGATCCTGAAGTCTGGGGACCAAATGCAAATGAGTTTGAACCAGAAAGGTTCAAAGATGGTGTCTCTAAGGCTTGCAAGTATCCACAAGCATATGTGCCATTTGGAGTGGGTCCTCGCTTGTGTGTTGGCAAGAACTTTGCAATGGTTCAGTTGAAGGTTGTTCTTGCTCTAATCATCTCTAGGTTTAGCTTCTCTCTATCTCCTAGCTATAAGCATGCTCCTGCTTATAGAATGATTATTGAACCAGGTCACGGTGTTCATATCCTTATTCACAAGATCTGA 1428 0.4195 MGMVMELVKLVCSIGVVGTVLWLVYVYGNEWVKSQRVRRKLRMQGISGPPPSFLHGNLLDMHQITAASQQGKVAGSSGDHTHDFTESLFPYFEFWRKQYGTLYTYSTGIKQHLYVNRPEIVSEMNKLMTLDLGKPSHITNNLASLLGNGILRANGISWSHQRKLVAPEFYMEKVKGMVDLMIESAQPLLTKWDRAIEAKGSDEVEIEVDEDLRSLAADVISRVCFGHSYSKGIEVFSKLRLMQKKMSKHGAFLFGIKGLREKLKYIWREKENEIEIMERENIYFAGHETIAVTASWALMLLAVYPEWQDRVRKEVAQIFSNGLPNADDLPLLKTLTMVIQEVLRLYPPGAFVSREVYKDTQIGELNVPKGVCLWTLIPTLHRDPEVWGPNANEFEPERFKDGVSKACKYPQAYVPFGVGPRLCVGKNFAMVQLKVVLALIISRFSFSLSPSYKHAPAYRMIIEPGHGVHILIHKI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211985g00002 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Stsc211985g00002 475 PRINTS E-class P450 group IV signature 90 113 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 PRINTS E-class P450 group IV signature 332 348 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 PRINTS E-class P450 group IV signature 407 423 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 PRINTS E-class P450 group IV signature 423 441 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 PRINTS E-class P450 group IV signature 276 302 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 Gene3D Cytochrome P450 32 277 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 PANTHER CYTOCHROME P450 FAMILY MEMBER 276 467 - -
Stsc211985g00002 475 Gene3D Cytochrome P450 278 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 Pfam Cytochrome P450 87 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 Pfam Cytochrome P450 280 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211985g00002 475 SUPERFAMILY Cytochrome P450 80 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211985g00002 Stsc-Chr211985 20403 24955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211985g00002 120 472 Cytochrome P450 AT5G24900 46.192 1.67e-135 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211985g00002 K20661 - qsa:O6P43_014873 598.971