Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211983g00002 ATGGGTTGCTGCCAGTCATCGTTGATGCTGAGAGTGAGAGAGGGAGGAGAAGCTCACCCTCACCCTGACAAGAAAGAGAAAGAGAAAGAGAAGGAGAAGGAGAAGGAAAACCACAAGGATCAAGCCCCCTACCTCCGCAACCACCACAAGGAGTCCCTCCAAGTCGCAGTGGCTGCTGACACCTGGTGGCTCTCCTTCTCCGAGTTCTCGCTGGCCGAGCTGAAGGCCGCCACCGACAATTTCAGCTCCGAATTCATAGTGTCGGAGAGCGGGGACAAGGCCCCTAACTTGGTCTACAAGGGGCGCCTCCGCGACCACTGGATTGCCGTCAAGAAGTTCCCCAAGGCCGCCTGGCCCGATCCCAAGCAGTTCGTGGACGAGGCATCCGGCGTGGGCAACCTCCGCCACCCCCGCCTCGCCAATCTGATCGGCTACTGCTGCGACGCTGACCACCGGCTCCTGGTGGCCCAGTACATGCCCAACGACACTCTGGCAAAGCACCTCTTCCACTGGGAGAATCAGACGATTGAGTGGGCCATGCGGTTGAGAGTGGCCCATTATATCGCCCAAGCTTTGAATTATTGCAGCTCTGAGGGCCGTCCCTTGTACCATGATTTGAATGCTTACCGTGTTCTTTTCGACGAGGAAGGTGATCCCCGCCTCTCCTGTTTTGGCTTGATCAAGAACAGCAGGGATGGCAAAAGTTACAGCACAAATCTTGCTTACACTCCTCCTGAATATTTAAGAAATGGAAGGGTCACCCCTGAAAGTGTCATTTACAGCTTTGGGACCGTTCTCCTAGATCTGCTTAGCGGCAAGCACATCCCTCCAAGTCAAGCACTAGATATGATACAGGGTAAGAACAACATGCTCTTGATGGATTCACATTTGGAGGGGAAGTTTTCTACAGAAGAGGCAAATGTAGTTGTTAATCTTGCCTCTAAATGTTTGCAATATGAACCCAGGGAGCGACCTGATACAAAGGATTTGGTTACAACACTTGCTTCACTGCATACAAAACCTGATGTTCATTCCCACATTATGCTTGGAATTCCAAAACAAGAGGAAGCTCCATCAACCCCACAANNNNNNNNNNTGTTCTAG 1104 0.5154 MGCCQSSLMLRVREGGEAHPHPDKKEKEKEKEKEKENHKDQAPYLRNHHKESLQVAVAADTWWLSFSEFSLAELKAATDNFSSEFIVSESGDKAPNLVYKGRLRDHWIAVKKFPKAAWPDPKQFVDEASGVGNLRHPRLANLIGYCCDADHRLLVAQYMPNDTLAKHLFHWENQTIEWAMRLRVAHYIAQALNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLIKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSQALDMIQGKNNMLLMDSHLEGKFSTEEANVVVNLASKCLQYEPRERPDTKDLVTTLASLHTKPDVHSHIMLGIPKQEEAPSTPQXXXXF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211983g00002 367 Pfam Protein tyrosine and serine/threonine kinase 100 334 IPR001245 GO:0004672|GO:0006468
Stsc211983g00002 367 MobiDBLite consensus disorder prediction 14 47 - -
Stsc211983g00002 367 Gene3D Transferase(Phosphotransferase) domain 1 160 351 - -
Stsc211983g00002 367 MobiDBLite consensus disorder prediction 1 47 - -
Stsc211983g00002 367 FunFam probable serine/threonine-protein kinase At4g35230 57 158 - -
Stsc211983g00002 367 SUPERFAMILY Protein kinase-like (PK-like) 64 341 IPR011009 -
Stsc211983g00002 367 Gene3D Phosphorylase Kinase; domain 1 58 158 - -
Stsc211983g00002 367 FunFam probable serine/threonine-protein kinase At5g41260 160 351 - -
Stsc211983g00002 367 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 32 357 IPR045845 GO:0004672|GO:0009742
Stsc211983g00002 367 ProSiteProfiles Protein kinase domain profile. 84 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211983g00002 Stsc-Chr211983 1516 6516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211983g00002 64 342 Glycoside Hydrolase AT3G07070 35.179 2.02e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Stsc211983g00002 PK_Tyr_Ser-Thr 1.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211983g00002 K14500 - gmx:100808907 588.186